Jatropha Genome Database
- JcCB0010811.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0010811.10 - phase: 0
(1494 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29827.m002614 Casbene synthase, chloroplast precursor, putative 137 2e-31
30169.m006314 Casbene synthase, chloroplast precursor, putative 94 3e-18
30065.m001152 Casbene synthase, chloroplast precursor, putative 76 7e-13
30065.m001155 casbene synthase, putative 74 3e-12
29910.m000944 Terpinolene synthase, chloroplast precursor, putative 60 4e-08
30169.m006276 Casbene synthase, chloroplast precursor, putative 56 6e-07
>29827.m002614 Casbene synthase, chloroplast precursor, putative
Length = 1656
Score = 137 bits (69), Expect = 2e-31
Identities = 185/221 (83%), Gaps = 2/221 (0%)
Strand = Plus / Plus
Query: 952 gatgatacatatgatgcatatggtacacttgatgaacttcaatct-tttacagctgcact 1010
||||||||||||||||| |||||||| ||| ||||| || || |||||||||||| |
Sbjct: 919 gatgatacatatgatgcttatggtaccattggcgaact-cagactctttacagctgcatt 977
Query: 1011 tgaaaggtttagtatggatgctactgatgagctaccggaatacatgaaagttctttataa 1070
|||||||| ||||| ||||||| | |||||||||| ||||||||| | |||||| ||
Sbjct: 978 tgaaaggtgcagtattgatgctattcatgagctaccagaatacatgcagtatctttacaa 1037
Query: 1071 ggctatcttcaatcactttaaagaaacagagaataatggcaatgaaggaagctcttacaa 1130
|||||| | || | ||| |||||||||||||| ||| |||||||||||||||||||||
Sbjct: 1038 ggctatactgaaactttttgaagaaacagagaatgatgccaatgaaggaagctcttacaa 1097
Query: 1131 aacctcttttgctagggagatgttgaaggaactgacaagag 1171
|||||||| ||| | ||||||||| ||||| ||||| ||||
Sbjct: 1098 aacctcttatgccaaggagatgttcaaggagctgactagag 1138
Score = 99.6 bits (50), Expect = 5e-20
Identities = 113/134 (84%)
Strand = Plus / Plus
Query: 374 ttttatttcgtgttctgaggcaacatggacataaaatgtcctgtgatgtgtttaacaagt 433
|||||||||| ||||| || |||||||||| |||| | | ||||||||||||||||| |
Sbjct: 344 ttttatttcgagttctaagacaacatggacgtaaagttccttgtgatgtgtttaacaaat 403
Query: 434 tcaaagacaacaatggagagttcaagaaaaccatcaccaacgatttaaaaggtctcctta 493
||| ||| |||||||||||||||||||| ||||||| ||| | ||||| |||||||
Sbjct: 404 acaaggacgacaatggagagttcaagaaagatatcaccagtgatgtgaaaggcctcctta 463
Query: 494 gcttatatgaagct 507
|||| |||||||||
Sbjct: 464 gcttgtatgaagct 477
Score = 52.0 bits (26), Expect = 1e-05
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 796 aggtggtggaaagacttaaatctgatggaaacgcttcattatacaagagacagaatagtg 855
||||||||||||||||| |||| | |||| |||| |||| ||||||||||||||||
Sbjct: 760 aggtggtggaaagacttggatcttacagaaaggctttcttatgcaagagacagaatagta 819
Query: 856 gaagcctatgtatgggca 873
|| | ||||||||||||
Sbjct: 820 gaggtgtatgtatgggca 837
>30169.m006314 Casbene synthase, chloroplast precursor, putative
Length = 1668
Score = 93.7 bits (47), Expect = 3e-18
Identities = 101/119 (84%)
Strand = Plus / Plus
Query: 949 gtagatgatacatatgatgcatatggtacacttgatgaacttcaatcttttacagctgca 1008
|||||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 922 gtagatgatacatacgatgcatatggtacacttgatgaactccaacgttttacaaatgca 981
Query: 1009 cttgaaaggtttagtatggatgctactgatgagctaccggaatacatgaaagttcttta 1067
|| |||||| || ||||||| |||||| ||||| || |||||||||||||||||
Sbjct: 982 tttcaaaggtgcgacattgatgctattgatgaactaccagattacatgaaagttcttta 1040
>30065.m001152 Casbene synthase, chloroplast precursor, putative
Length = 849
Score = 75.8 bits (38), Expect = 7e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 949 gtagatgatacatatgatgcatatggtacacttgatgaacttcaatcttttaca 1002
|||||||||||||||||||||||||||||| |||||||||| || | |||||||
Sbjct: 112 gtagatgatacatatgatgcatatggtacaattgatgaactccagtgttttaca 165
>30065.m001155 casbene synthase, putative
Length = 471
Score = 73.8 bits (37), Expect = 3e-12
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 949 gtagatgatacatatgatgcatatggtacacttgatgaact 989
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 427 gtagatgatacatatgatgcatatggtacaattgatgaact 467
Score = 61.9 bits (31), Expect = 1e-08
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 733 tttgcaaagttggactataatagactacaattgttgtatagacaagagctggccttgctg 792
|||||||||||||| | |||| | ||||||| ||||| | ||||||||| |||| ||
Sbjct: 211 tttgcaaagttggattttaatcggttacaattattgtacaaacaagagctagcctctctc 270
Query: 793 tcgaggtggtggaaagacttaaatctg 819
|| | ||||||||||||||||||||||
Sbjct: 271 tcaaagtggtggaaagacttaaatctg 297
>29910.m000944 Terpinolene synthase, chloroplast precursor, putative
Length = 1431
Score = 60.0 bits (30), Expect = 4e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 952 gatgatacatatgatgcatatggtacacttgatgaact 989
||||||||||||||| ||||||||||| ||||||||||
Sbjct: 691 gatgatacatatgattcatatggtacatttgatgaact 728
Score = 56.0 bits (28), Expect = 6e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 798 gtggtggaaagacttaaatctgatggaaacgcttcattatacaagagacagaatagtgga 857
|||||||||||| ||||||| | ||| | |||| ||||||||||||||||| |||||
Sbjct: 537 gtggtggaaagatataaatcttacggagaaacttccatatacaagagacagaattgtgga 596
Query: 858 agcctatgtatgggca 873
||||||| |||||||
Sbjct: 597 ggcctatgcatgggca 612
>30169.m006276 Casbene synthase, chloroplast precursor, putative
Length = 1845
Score = 56.0 bits (28), Expect = 6e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 733 tttgcaaagttggactataatagactacaatt 764
|||||||||||||||||||||||| |||||||
Sbjct: 841 tttgcaaagttggactataatagagtacaatt 872