Jatropha Genome Database

JcCB0010451.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0010451.10 - phase: 0 /partial
         (465 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28613.m000144 ubiquitin-conjugating enzyme E2, putative               587   e-167

>28613.m000144 ubiquitin-conjugating enzyme E2, putative
          Length = 474

 Score =  587 bits (296), Expect = e-167
 Identities = 422/464 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcatcaagggcaaggcttttcaaggaatacaaagaggtgcagcgagagaaagcagcagat 60
           ||||||||||||||||| || ||||| ||||||||||| |||||||||||| | ||||||
Sbjct: 7   gcatcaagggcaaggctatttaaggagtacaaagaggtacagcgagagaaaactgcagat 66

                                                                       
Query: 61  cctgatattcaattagtttgcgatgattctaacatcttcaagtggactgctcttatcaag 120
           |||||||||||| |||| ||||||||||| ||||| || ||||||| ||| ||||| |||
Sbjct: 67  cctgatattcaactagtctgcgatgattccaacatttttaagtggaatgcacttattaag 126

                                                                       
Query: 121 ggaccaacagagacaccttatgagggtggagttttccaacttgccttctctgttccggag 180
           ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| || 
Sbjct: 127 ggaccaacagaaacaccgtatgagggtggagtcttccagcttgccttctctgttccagaa 186

                                                                       
Query: 181 cagtatcctttgcaacctcctcaagtgcggttcttgacaaaaatatttcatcccaatgtg 240
           ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 187 cagtatcctctgcaacctccacaagtgcggtttttgacaaaaatatttcatccaaatgtg 246

                                                                       
Query: 241 cattttaagacaggagagatatgtcttgatatcttgaagaatgcatggagcccagcatgg 300
           ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||
Sbjct: 247 cattttaagacaggagagatatgccttgatatcttgaagaatgcttggagtccagcttgg 306

                                                                       
Query: 301 acgcttcagtctgtttgcagggctataattgcgttgatggcccaccctgaacctgatagc 360
           ||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||
Sbjct: 307 acgcttcagtctgtttgcagggctataatcgctttgatggcccatcccgaacctgatagc 366

                                                                       
Query: 361 cctttaaactgtgattcaggcaaccttctgcgttctggtgatatcagaggttatcaatcc 420
           |||||||| |||||||| ||||| ||||| || ||||||||||||||||||| ||| |||
Sbjct: 367 cctttaaattgtgattccggcaatcttcttcgatctggtgatatcagaggttttcagtcc 426

                                                       
Query: 421 atggcaagaatgtatactagactcgcagcctcaccaaagaaagg 464
           ||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 427 atggctagaatgtatactagactcgcagcctctcctaagaaagg 470