Jatropha Genome Database

JcCB0009541.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0009541.20 - phase: 0 
         (501 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014366 conserved hypothetical protein                          105   2e-22

>30147.m014366 conserved hypothetical protein
          Length = 486

 Score =  105 bits (53), Expect = 2e-22
 Identities = 156/189 (82%), Gaps = 1/189 (0%)
 Strand = Plus / Plus

                                                                       
Query: 250 agaagacacagtcttcctgtgaggccttgtagttcttattctttctttgtaatggctaat 309
           |||||||| ||||| ||||  || || |||||||| ||| |||| ||||||||| | |||
Sbjct: 298 agaagacatagtctgcctgcaagaccatgtagttcctatgctttgtttgtaatgtcaaat 357

                                                                       
Query: 310 tggggttcggttaagaattcttcatttagtgaagtgagcaagacgcttggtcagatgtgg 369
           |||| ||| |||||||||||||| ||  | ||||  |||||| | || ||||  || |||
Sbjct: 358 tgggtttctgttaagaattcttcgttcggggaagcaagcaagtctctcggtcgtatatgg 417

                                                                       
Query: 370 ggccaactttccggccaagagaaaaaggtgttca-tggacatggcctcgaaggacagtgc 428
           |||||||| |||  ||||||||| ||||| |||| |||||||||||| ||||||||||||
Sbjct: 418 ggccaactctccctccaagagaagaaggtcttcattggacatggccttgaaggacagtgc 477

                    
Query: 429 aagatataa 437
           ||| |||||
Sbjct: 478 aaggtataa 486