Jatropha Genome Database
- JcCB0009521.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0009521.30 + phase: 2 /partial
(1150 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27810.m000635 DNA-damage-inducible protein f, putative 613 e-174
29606.m000099 DNA-damage-inducible protein f, putative 84 2e-15
29606.m000098 DNA-damage-inducible protein f, putative 80 3e-14
30169.m006452 DNA-damage-inducible protein f, putative 68 1e-10
>27810.m000635 DNA-damage-inducible protein f, putative
Length = 2721
Score = 613 bits (309), Expect = e-174
Identities = 546/625 (87%)
Strand = Plus / Plus
Query: 6 ttttcagaaatgatgaattggggctagaaatagcagaaattgcagttcccgcagcacttg 65
||||||| || ||||| || ||| ||||||||||| |||||||| |||| ||||||||||
Sbjct: 1283 ttttcaggaaggatgagttagggatagaaatagcacaaattgcaattcctgcagcacttg 1342
Query: 66 cattagcagcagatcctattgcttctctgattgacacagcattcattggccatataggac 125
| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1343 ctttagcagcagatcctgttgcttctctgattgacacagcattcattggccatttaggac 1402
Query: 126 ctgtggagcttgccgctgtaggagtttcaattgctatcttcaatcaagtgtcaaagattg 185
||||||||||||| ||||| || ||||| |||||| | || |||||||| ||||||||||
Sbjct: 1403 ctgtggagcttgctgctgtgggtgtttctattgctgtatttaatcaagtatcaaagattg 1462
Query: 186 caatatttccgcttgtcagtgttacaacttctcttgttgccaaggaagatactactggaa 245
||||||| || ||||||||||||||||||||| |||||||| ||||| || |||||||||
Sbjct: 1463 caatattcccccttgtcagtgttacaacttcttttgttgccgaggaaaatgctactggaa 1522
Query: 246 tattgagtactgaagtgcatgaaactgaaaaacttgaagatggtgttgctgtcaataagg 305
| |||||||| | ||||| |||| || | | | ||| ||||| | ||||||||||||
Sbjct: 1523 aactgagtactcatgtgcaggaaaatgcatcattagaatatggtttcactgtcaataagg 1582
Query: 306 aaatggaagagctgctacctaaagctgagtccacacacaaaccatcctctgtaagcagtg 365
|||||||||||||| ||||||||| || |||||| ||||| |||||||||||||||||
Sbjct: 1583 aaatggaagagctgttacctaaaggtgcatccacaaacaaaacatcctctgtaagcagta 1642
Query: 366 tttgcacaaaaagtgattatgagagaaagcatataccatctgcttcttcagcattggttg 425
|| ||| ||||| || ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1643 ctttcaccaaaaggcatgatgagagaaggcatataccatctgcttcttcagcattggttg 1702
Query: 426 ttggttgtgttcttggcctccttcaggctttcttcctcatttttggtgctaaaccaatcc 485
|||||||||| ||||| | |||||||||| || ||||||||| ||||||| ||||||
Sbjct: 1703 ttggttgtgtgcttggaataattcaggctttattgctcattttttctgctaaaacaatcc 1762
Query: 486 tgaactacatgggtgtacattcagattcacctatgttaataccggcacaacaatacttaa 545
||| ||||||||||||| |||| ||||| || ||||||||||| ||||||||||||||
Sbjct: 1763 tgagctacatgggtgtatattctgattctcccatgttaataccagcacaacaatacttgg 1822
Query: 546 cattaaggtcactgagtgctcctgctgttcttctttctttggctatgcaaggggtttttc 605
||| ||||| || |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1823 tattgaggtcgcttggtgctcctgctgttcttctttctttggccatgcaaggggtttttc 1882
Query: 606 gaggaattaaggatacaaaaactcc 630
| |||||||||||||||||||||||
Sbjct: 1883 ggggaattaaggatacaaaaactcc 1907
Score = 377 bits (190), Expect = e-103
Identities = 373/434 (85%)
Strand = Plus / Plus
Query: 660 tgagggtaatagctgcgacatgttgtgtcaccttggctgcatcattggctgcgagacatg 719
|||||||||||||| | |||| |||||||| |||| |||||| | ||||| |||||||
Sbjct: 2135 tgagggtaatagcttcaacattctgtgtcactctggcagcatcacttgctgcaagacatg 2194
Query: 720 gatctacttcaatggctgcatttcaggtttgcttgcaaatctggttagcaacttctttgc 779
||||||||||||||||||||||||||||||||||||| || | | ||||||||||||
Sbjct: 2195 gatctacttcaatggctgcatttcaggtttgcttgcagattggcatgtcaacttctttgc 2254
Query: 780 ttgcagatgggctggccgtggctggacaggcaatccttgccactgcatttgcaaacaagg 839
|||||||||||||||| ||||| ||||| ||||||||||| | ||| |||||||| || |
Sbjct: 2255 ttgcagatgggctggctgtggccggacaagcaatccttgctagtgcttttgcaaataacg 2314
Query: 840 attatgacaaagcgaaagccactacttctcgtgtattgcagtttggtttggttctagggc 899
| |||||||| || ||||||||| ||||||||||||||||||| ||||||||||| ||||
Sbjct: 2315 actatgacaaggccaaagccactgcttctcgtgtattgcagttaggtttggttcttgggc 2374
Query: 900 tactgctatctgtcatcctttcagttggattaccatttgcttcaggactatttacagaag 959
||||||| || |||||||||| ||||||| ||| ||||||||| || ||||||||||||
Sbjct: 2375 tactgctctcagtcatccttttagttggactacagtttgcttcaagattatttacagaag 2434
Query: 960 acataaatgttttgcgcattattagcattggcatcccctttgttacagcaactcaaccca 1019
|||| | ||||||| | |||||| ||||||| || |||||||||||||| ||||| |
Sbjct: 2435 acatcagcgttttgcaccttattactgttggcatgccgtttgttacagcaacccaaccga 2494
Query: 1020 ttaatgttttagccttcgttttcgatggagtcaactatggagcatctgattttgcatact 1079
| ||||||||||| || |||||||| ||| | |||||||||||||| || || |||||||
Sbjct: 2495 taaatgttttagcatttgttttcgacggaattaactatggagcatcagacttcgcatact 2554
Query: 1080 ccgcatactcaatg 1093
| ||||||||||||
Sbjct: 2555 ctgcatactcaatg 2568
>29606.m000099 DNA-damage-inducible protein f, putative
Length = 1557
Score = 83.8 bits (42), Expect = 2e-15
Identities = 90/106 (84%)
Strand = Plus / Plus
Query: 68 ttagcagcagatcctattgcttctctgattgacacagcattcattggccatataggacct 127
||||| || |||||| ||||||| ||||||||||||||||| ||||||||| ||||| |
Sbjct: 145 ttagctgctgatcctgttgcttcactgattgacacagcatttattggccatctaggagcg 204
Query: 128 gtggagcttgccgctgtaggagtttcaattgctatcttcaatcaag 173
||||| | || |||||||||||||| ||||| || |||||||||
Sbjct: 205 gtggaaatagctgctgtaggagtttctattgcgataatcaatcaag 250
Score = 56.0 bits (28), Expect = 5e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 587 gctatgcaaggggtttttcgaggaattaaggatacaaaaactcc 630
||||||||||| |||||| ||||| |||| ||||||||||||||
Sbjct: 676 gctatgcaaggagtttttagaggatttaaagatacaaaaactcc 719
>29606.m000098 DNA-damage-inducible protein f, putative
Length = 1641
Score = 79.8 bits (40), Expect = 3e-14
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 84 ttgcttctctgattgacacagcattcattggccatataggacctgtggagcttgccgctg 143
||||||| |||||||||| ||||||||||||||| ||||||| ||||| | || ||||
Sbjct: 161 ttgcttcattgattgacactgcattcattggccatctaggaccggtggaaatagctgctg 220
Query: 144 taggagtttcaattgctatcttcaatca 171
|||||||||| ||||| || ||||||||
Sbjct: 221 taggagtttctattgcgatattcaatca 248
Score = 56.0 bits (28), Expect = 5e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 587 gctatgcaaggggtttttcgaggaattaaggatacaaaaactcc 630
||||||||||| |||||| ||||| |||| ||||||||||||||
Sbjct: 760 gctatgcaaggagtttttagaggatttaaagatacaaaaactcc 803
Score = 52.0 bits (26), Expect = 8e-06
Identities = 95/118 (80%)
Strand = Plus / Plus
Query: 976 cattattagcattggcatcccctttgttacagcaactcaacccattaatgttttagcctt 1035
|||||| ||||| ||||| || |||||| |||| || ||||| ||||| |||||||
Sbjct: 1347 cattataagcataggcattccatttgttgcagctacacaacctattaactcaatagcctt 1406
Query: 1036 cgttttcgatggagtcaactatggagcatctgattttgcatactccgcatactcaatg 1093
|| |||||||| || |||| ||||| |||||||||||||| || ||||| ||||||
Sbjct: 1407 tgtattcgatggtgtaaacttcggagcttctgattttgcatattctgcatattcaatg 1464
>30169.m006452 DNA-damage-inducible protein f, putative
Length = 1569
Score = 67.9 bits (34), Expect = 1e-10
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 509 gattcacctatgttaataccggcacaacaatacttaacattaaggtcactgagtgctcct 568
|||||||||||| | | || || |||||||| || ||||| ||||||||| ||||||||
Sbjct: 601 gattcacctatgctgacccctgctcaacaatatttgacattgaggtcactgggtgctcct 660
Query: 569 gctgttcttctttctttggctatgcaaggggtttttcgaggaattaaggatacaaaaact 628
|| |||||||||| ||||| |||||||| || || || ||| |||| || ||||| |||
Sbjct: 661 gcaattcttctttccttggcaatgcaaggagtcttccgcggatttaaagacacaaagact 720
Query: 629 cc 630
||
Sbjct: 721 cc 722
Score = 67.9 bits (34), Expect = 1e-10
Identities = 91/110 (82%)
Strand = Plus / Plus
Query: 980 attagcattggcatcccctttgttacagcaactcaacccattaatgttttagccttcgtt 1039
||||| || ||||| || |||||| ||| ||| |||||||| || | ||||| || ||
Sbjct: 1288 attagtataggcattccgtttgttgcaggaacgcaacccatcaacgccttagcatttgta 1347
Query: 1040 ttcgatggagtcaactatggagcatctgattttgcatactccgcatactc 1089
|| ||||| ||||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 1348 tttgatggtgtcaactttggagcttctgattttgcatactctgcatactc 1397
Score = 65.9 bits (33), Expect = 5e-10
Identities = 126/157 (80%)
Strand = Plus / Plus
Query: 83 attgcttctctgattgacacagcattcattggccatataggacctgtggagcttgccgct 142
||||| |||||| | ||||||||||| |||||||| ||||| | || || || || |||
Sbjct: 163 attgcctctctggtggacacagcatttattggccaaataggttcagtagaactagctgct 222
Query: 143 gtaggagtttcaattgctatcttcaatcaagtgtcaaagattgcaatatttccgcttgtc 202
|| |||||||| |||||| | || |||||||| || | || |||||||| || ||||||
Sbjct: 223 gttggagtttctattgctctatttaatcaagtctcgagaatcgcaatattcccacttgtc 282
Query: 203 agtgttacaacttctcttgttgccaaggaagatacta 239
||| | ||||| ||| ||||||| | ||||||||||
Sbjct: 283 agtatcacaacctcttttgttgctgaagaagatacta 319