Jatropha Genome Database

JcCB0008751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0008751.10 - phase: 0 /pseudo/partial
         (568 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30115.m001209 zeaxanthin epoxidase, putative                          414   e-115

>30115.m001209 zeaxanthin epoxidase, putative
          Length = 1998

 Score =  414 bits (209), Expect = e-115
 Identities = 302/333 (90%)
 Strand = Plus / Plus

                                                                       
Query: 157 gctattgatttagaggttgctgaagaggttatggaagccgggtgtgttactggtgataga 216
           |||||||||||||||||||||||||||||||||  ||| |||||| ||||||||||||||
Sbjct: 418 gctattgatttagaggttgctgaagaggttatgagagctgggtgtattactggtgataga 477

                                                                       
Query: 217 attaacgggcttgttgatggggtttctggtacttggtatgtcaagtttgataccttcact 276
           ||||| || || |||||||| |||||||||||||||||   |||||||||||||||||||
Sbjct: 478 attaatggcctggttgatggtgtttctggtacttggtactgcaagtttgataccttcact 537

                                                                       
Query: 277 cctgcagcagaacgagggcttccagtcacgagagttattagccgaatgactttgcaacaa 336
           |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 538 cctgcagcagaacgggggcttccagtcacaagagtcattagccgaatgactttgcaacaa 597

                                                                       
Query: 337 atccttgctcttgcagttggagaagatgtgattcgaaatgaaagtaatgttgttagtttt 396
           ||| | ||   ||||||||||||||||||||||   |||| |||||||||| ||| ||||
Sbjct: 598 atcttagcgtgtgcagttggagaagatgtgattatgaatgcaagtaatgttattaatttt 657

                                                                       
Query: 397 caggatgatggggataaggtcactgtgacccttgagaatggacagcatttcgaaggtgat 456
           |||||| ||| |||||||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 658 caggataatgaggataaggtcaccgtgacgcttgagaatggacagcaattcgaaggtgat 717

                                            
Query: 457 ctcctagttggtgctgatggaatatggtcaaag 489
           ||||||||||||||||||||||| |||||||||
Sbjct: 718 ctcctagttggtgctgatggaatttggtcaaag 750



 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 81  aggtgggattgaaggattggtttttgcactagcaactaggaggaaggattttgaagtgtt 140
           ||||||||||| ||| |||||||||||| ||||| |||  |||||||  |||||||| ||
Sbjct: 267 aggtgggattggagggttggtttttgcattagcagctaaaaggaagggctttgaagtatt 326

                       
Query: 141 agttttttagaa 152
            |||||| ||||
Sbjct: 327 ggtttttgagaa 338