Jatropha Genome Database
- JcCB0008641.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0008641.10 + phase: 2 /pseudo/partial
(739 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27894.m000780 conserved hypothetical protein 343 9e-94
29955.m001170 ubiquitin-protein ligase, putative 56 3e-07
>27894.m000780 conserved hypothetical protein
Length = 1698
Score = 343 bits (173), Expect = 9e-94
Identities = 527/642 (82%), Gaps = 6/642 (0%)
Strand = Plus / Plus
Query: 3 aagattgaacaatttgagatggaggttgattttggagagaaattgaaactattaggacaa 62
|||||||| |||| |||||||||||||||||||||||||| ||||||| || | ||| ||
Sbjct: 508 aagattgagcaatatgagatggaggttgattttggagagagattgaaagtaat-ggataa 566
Query: 63 aaatgtcggccttaggcgttattgggtgtttgctaggcacccgaaatgggtaataacg-- 120
|| ||| || |||||| ||||||||| |||| ||| ||||| |||||| | |||
Sbjct: 567 aagtgttgggtttaggcattattgggtttttgttagacacccaaaatggagattaagtga 626
Query: 121 aaaaccatgggagcaatggacattagttagtgaagttgttttagaagctggtaagca--- 177
|||| |||||||||| |||||||| || |||||| ||||| | || ||||| || ||
Sbjct: 627 aaaatcatgggagcagtggacattggtgagtgaaattgttgttgaggctggcaaacaaca 686
Query: 178 gaggatagataaatggaatttgatgggtcgattaggtaatcaagcaagaaaactgattac 237
| || ||||||| ||||||||||||||| | ||||||||| ||| || || |||| ||
Sbjct: 687 gcggttagataagtggaatttgatgggtaggttaggtaatacagctaggaagttgataac 746
Query: 238 acaatgtgctgcttggtttaggccagatattatctatgttaagagaccagtttatcaatg 297
||||||||||||||||||||| || |||||||| ||||||||||| || |||||||| ||
Sbjct: 747 acaatgtgctgcttggtttagaccggatattatttatgttaagaggccggtttatcagtg 806
Query: 298 taggtttgagcctcaagaggatttctttaggggtttagtgccatttttggatccgaaaac 357
||| ||||||||||| ||| || || | || |||| |||||| || |||||||||||
Sbjct: 807 tagatttgagcctcagatggactttttcaaggctttaacgccattgttagatccgaaaac 866
Query: 358 agaaagagactttatatttgagcttaggaatgaagaagatggtgggagtgtagaaatgtg 417
||| | |||||||| |||||| | | |||||| || ||||| |||| | ||||||||||
Sbjct: 867 agagaaggactttatgtttgagttgaagaatgaggaggatggagggaatatagaaatgtg 926
Query: 418 tacatattatgaaggattgtgtaagattgtaaaagttagtcaaaaggcttatgtagatga 477
| | |||| |||||| |||||||||||||| || ||||||| || || | ||| |||||
Sbjct: 927 ttcgtattttgaagggttgtgtaagattgtgaagattagtcagaaagcatttgttgatga 986
Query: 478 tgtagtgaatgcatatgagaagttgagtgaggagaagaaatccaggtgtttagagttctt 537
||| |||||||| ||||||||||| || |||||||||||||| | ||| || ||||||||
Sbjct: 987 tgtggtgaatgcgtatgagaagttaagcgaggagaagaaatcaaagtgcttggagttctt 1046
Query: 538 gcttaggaatcatccagtgcaattgttgcatccctatactaaggagtggaaggccaagtt 597
| | ||||||| |||||||| ||| ||||||| ||||| || || |||||||| |||||
Sbjct: 1047 gttacggaatcacccagtgcagttgctgcatccatataccaaagaatggaaggctaagtt 1106
Query: 598 agaggaaatggagttgggctgtgatgcacctgacgatgatga 639
|| |||||||| |||||||| ||||||||||| ||||||||
Sbjct: 1107 ggacgaaatggaattgggctgcgatgcacctgatgatgatga 1148
>29955.m001170 ubiquitin-protein ligase, putative
Length = 1389
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 683 gatgatggtgatggtgatgacgatgatg 710
||||||||||||||||||||||||||||
Sbjct: 77 gatgatggtgatggtgatgacgatgatg 50