Jatropha Genome Database
- JcCB0008631.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0008631.10 - phase: 0
(1341 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28176.m000273 Omega-3 fatty acid desaturase, chloroplast precurs... 1021 0.0
29814.m000719 Omega-3 fatty acid desaturase, chloroplast precursor 442 e-123
29681.m001360 Omega-3 fatty acid desaturase, endoplasmic reticul... 151 1e-35
>28176.m000273 Omega-3 fatty acid desaturase, chloroplast precursor,
putative
Length = 1359
Score = 1021 bits (515), Expect = 0.0
Identities = 911/1043 (87%)
Strand = Plus / Plus
Query: 298 aaattgtccgatattagggcagctataccaaagcattgttgggttaaggacccatggaag 357
|||||||| |||||||| || ||||||||||||||||| ||| ||||| | |||||| |
Sbjct: 316 aaattgtctgatattagagctgctataccaaagcattgctggattaagaattcatggagg 375
Query: 358 tcaatgagctatgtagttagagatgtcgctgtggtttttggtttagctgcagctgcagct 417
|||||||| ||||| ||||| ||||| ||||| ||||||||||||||||| ||||| |||
Sbjct: 376 tcaatgagttatgttgttagggatgttgctgttgtttttggtttagctgctgctgctgct 435
Query: 418 tatcttaacaattgggtggtttggcctctgtattgggctgctcagggaacaatgttttgg 477
||||| || |||||||| ||||||||| |||||||||||||||| ||||| |||||||||
Sbjct: 436 tatctcaataattgggttgtttggcctttgtattgggctgctcaaggaaccatgttttgg 495
Query: 478 gctctgtttgttcttggccatgattgtgggcatggaagcttttcgaacaatcccaagcta 537
||| |||||||||||||||||||||||||||||||||||||||| || ||| ||| ||
Sbjct: 496 gctttgtttgttcttggccatgattgtgggcatggaagcttttcaaataataataagtta 555
Query: 538 aatagtgttgttgggcaccttcttcattcttcaattcttgtaccttatcatggatggaga 597
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatagtgttgttggacatcttcttcattcttcaattcttgtaccttatcatggatggaga 615
Query: 598 attagccataggactcatcatcaaaaccatggacacgttgagaatgatgaatcatggcat 657
|| || || |||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 616 atcagtcacaggactcaccatcaaaaccatggacatgttgagaatgatgaatcatggcat 675
Query: 658 ccgctgcctgagaaaatatttaggaatttggacaacattacaagaaaattgcgcttcact 717
||| || |||||||||| |||||||||||||| |||||| || | | |||| |||| |
Sbjct: 676 ccgttgtctgagaaaatctttaggaatttggatggcattaccaggacactgcgtttcagt 735
Query: 718 gttccttttccaatgcttgcctatcctttctatctttggaatagaagcccgggaaaaact 777
| ||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||
Sbjct: 736 ctacctttcccaatgcttgcatatcctttctatctttggagcagaagccctggaaaaact 795
Query: 778 ggttcgcactttcatccagacagtgacttgttcttgccgaatgaaaggaaggatgtgatt 837
|| || ||||| ||||| ||||||||| |||| || |||||| |||||||||||||||
Sbjct: 796 ggctctcacttccatccggacagtgacctgtttgtgaagaatgagaggaaggatgtgatt 855
Query: 838 acttccaccatatgctggactgcgatggctgctttgcttgtgggcttatcttttgtaatg 897
||||||||| |||||||||| || |||| ||||||||||||||| |||||||||||||||
Sbjct: 856 acttccaccgtatgctggacagccatggttgctttgcttgtgggtttatcttttgtaatg 915
Query: 898 ggtcctattcaattgcttaagctgtatggaatcccatattggggttttgttatgtggctg 957
|||||||| || ||||||||||| |||||||| ||||| |||| ||||||||||||||||
Sbjct: 916 ggtcctatacagttgcttaagctctatggaattccatactgggtttttgttatgtggctg 975
Query: 958 gactttgtaacgtacttgcatcaccatggtcatgaagagaaacttccttggtaccgcgga 1017
|||| ||| || ||| |||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 976 gactctgtgacatacatgcatcaccatggtcatgaagataaacttccttggtaccgtgga 1035
Query: 1018 aacgaatggagttatttaaggggaggactgacgacacttgatcgtgattatggatggatt 1077
|| |||||||||||| | || ||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 1036 aaagaatggagttatctgagaggagggcttacgacacttgatcgtgactatggctggatt 1095
Query: 1078 aataatatccatcatgacattggaacccatgttattcaccacttatttcctcaaatccct 1137
||||| ||||||||||| || || |||||||| ||||||||| | || || ||||||||
Sbjct: 1096 aataacatccatcatgatatagggacccatgtcattcaccacctcttcccccaaatccca 1155
Query: 1138 cattatcacttaattgaagcaactgaggcagccaaacctgtgcttggcaaatactaccgg 1197
||||||||||||||||| |||||||| ||||||||||| ||||| || || |||||||||
Sbjct: 1156 cattatcacttaattgaggcaactgaagcagccaaacccgtgctcggaaagtactaccgg 1215
Query: 1198 gagccagagaaatcagggcctttaccttttcacctaattggaagtttggtaagaagctta 1257
|||||| |||||||||| | |||||||||||||||||||| | ||| ||||||||||
Sbjct: 1216 gagccaaagaaatcaggacttttaccttttcacctaattgaagatttaataagaagcttg 1275
Query: 1258 aggaaagatcactatgttagtgatactggagatgtagtttactaccagactgatcggcaa 1317
| |||||| ||||| ||||| || ||||| ||||| | ||||| || ||||||| |||
Sbjct: 1276 aagaaagaccactacgttagcgacactggggatgttttgtactatcaaactgatcctcaa 1335
Query: 1318 cttagcggctcgacatcagagta 1340
||||| ||| | ||||||||||
Sbjct: 1336 cttagtggcacttcatcagagta 1358
Score = 63.9 bits (32), Expect = 2e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 atggcgagttgggtcttatcagaatgtggcttaaagccgcttcctcaa 48
|||||||||||||| |||||||||||||||||||||| ||| |||||
Sbjct: 1 atggcgagttgggttatatcagaatgtggcttaaagcctctttctcaa 48
>29814.m000719 Omega-3 fatty acid desaturase, chloroplast precursor
Length = 1383
Score = 442 bits (223), Expect = e-123
Identities = 802/995 (80%)
Strand = Plus / Plus
Query: 307 gatattagggcagctataccaaagcattgttgggttaaggacccatggaagtcaatgagc 366
||||| || |||||||||||||| ||||||||||||||| | ||||||| || ||||||
Sbjct: 340 gatataagagcagctataccaaaacattgttgggttaagaatccatggagatctatgagc 399
Query: 367 tatgtagttagagatgtcgctgtggtttttggtttagctgcagctgcagcttatcttaac 426
|| || | |||||||| | |||||||||||| |||||||| | ||| ||||| |||||
Sbjct: 400 tacgttttgagagatgttgttgtggtttttggattagctgctgttgctgcttactttaac 459
Query: 427 aattgggtggtttggcctctgtattgggctgctcagggaacaatgttttgggctctgttt 486
|||||||| | ||||||||| || ||| | |||||| || ||||| |||||||| |||
Sbjct: 460 aattgggttgcttggcctctttactggttttgtcaggggactatgttctgggctctcttt 519
Query: 487 gttcttggccatgattgtgggcatggaagcttttcgaacaatcccaagctaaatagtgtt 546
||||||||||| |||||||| |||||||| || || || ||||| ||||| ||||||||
Sbjct: 520 gttcttggccacgattgtggtcatggaagtttctccaataatccaaagctgaatagtgtg 579
Query: 547 gttgggcaccttcttcattcttcaattcttgtaccttatcatggatggagaattagccat 606
||||| || || |||||||||||||| ||||| |||||||||||||||||||| || ||
Sbjct: 580 gttggtcatctgcttcattcttcaatccttgttccttatcatggatggagaatcagtcac 639
Query: 607 aggactcatcatcaaaaccatggacacgttgagaatgatgaatcatggcatccgctgcct 666
|| || |||||||||||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 640 agaacccatcatcaaaaccatggacatgttgagaatgatgaatcttggcatccattgtct 699
Query: 667 gagaaaatatttaggaatttggacaacattacaagaaaattgcgcttcactgttcctttt 726
|||||||| || | | ||||| || | |||| | |||| | |||| | | |||||
Sbjct: 700 gagaaaatcttcaaaagcttggataatgtcacaaagacattgaggttcagtttgcctttc 759
Query: 727 ccaatgcttgcctatcctttctatctttggaatagaagcccgggaaaaactggttcgcac 786
|| |||||||| |||||||||||||| |||| |||||| || ||||| | || || ||
Sbjct: 760 cccatgcttgcttatcctttctatctgtggagtagaagtcctggaaagaagggctctcat 819
Query: 787 tttcatccagacagtgacttgttcttgccgaatgaaaggaaggatgtgattacttccacc 846
|||||||||||||||| ||||| | || || ||||| |||||| | ||||| || ||
Sbjct: 820 tttcatccagacagtggtttgtttgtcccaaaggaaagaaaggatataattacctcaact 879
Query: 847 atatgctggactgcgatggctgctttgcttgtgggcttatcttttgtaatgggtcctatt 906
|| |||||||| ||||| || |||||||| |||| ||| |||||||||| |
Sbjct: 880 gcctgttggactgcaatggcagcgttgcttgtttacttaaacttttcaatgggtcctgtc 939
Query: 907 caattgcttaagctgtatggaatcccatattggggttttgttatgtggctggactttgta 966
||| ||||||| || ||||| || || || ||| ||||| |||||| ||||||||||
Sbjct: 940 caaatgcttaaactctatggcattccctactggatctttgtcatgtggttggactttgtg 999
Query: 967 acgtacttgcatcaccatggtcatgaagagaaacttccttggtaccgcggaaacgaatgg 1026
|| |||||||| ||||||||||| || || |||||||| ||||| |||||||| | ||||
Sbjct: 1000 acctacttgcaccaccatggtcacgaggataaacttccctggtatcgcggaaaggcatgg 1059
Query: 1027 agttatttaaggggaggactgacgacacttgatcgtgattatggatggattaataatatc 1086
|||||| |||| ||||| || || || |||||||| || || |||||||| ||||| |||
Sbjct: 1060 agttatctaagaggagggcttacaacccttgatcgcgactacggatggatcaataacatc 1119
Query: 1087 catcatgacattggaacccatgttattcaccacttatttcctcaaatccctcattatcac 1146
|| |||||||| |||||||| |||||||| || | || ||||||||||| || || |||
Sbjct: 1120 caccatgacataggaacccacgttattcatcatctcttccctcaaatcccacactaccac 1179
Query: 1147 ttaattgaagcaactgaggcagccaaacctgtgcttggcaaatactaccgggagccagag 1206
||| | ||||||||||| ||||| || ||||| | || |||||||||||||| ||| ||
Sbjct: 1180 ttagtcgaagcaactgaagcagctaagcctgtaatggggaaatactaccgggaaccaaag 1239
Query: 1207 aaatcagggcctttaccttttcacctaattggaagtttggtaagaagcttaaggaaagat 1266
||||| || ||| | || || ||||| | |||||| | ||||||||| | | | |||
Sbjct: 1240 aaatctggacctcttccattgcacctgctaggaagtcttgtaagaagcatgaaagaggat 1299
Query: 1267 cactatgttagtgatactggagatgtagtttacta 1301
|| ||||| ||||||||||||||||| || |||||
Sbjct: 1300 cattatgtaagtgatactggagatgtcgtatacta 1334
>29681.m001360 Omega-3 fatty acid desaturase, endoplasmic reticulum,
putative
Length = 1521
Score = 151 bits (76), Expect = 1e-35
Identities = 169/200 (84%)
Strand = Plus / Plus
Query: 949 atgtggctggactttgtaacgtacttgcatcaccatggtcatgaagagaaacttccttgg 1008
|||||||| || |||||||| ||| |||||||||| || ||||| |||||||||| |||
Sbjct: 910 atgtggcttgattttgtaacatacctgcatcaccacggacatgagcagaaacttccctgg 969
Query: 1009 taccgcggaaacgaatggagttatttaaggggaggactgacgacacttgatcgtgattat 1068
|||||||| || |||||||||||| | | || ||||| || ||| ||||||||||||||
Sbjct: 970 taccgcggcaaggaatggagttatctgcgtggcggactaacaacagttgatcgtgattat 1029
Query: 1069 ggatggattaataatatccatcatgacattggaacccatgttattcaccacttatttcct 1128
|||||||| ||||| || || ||||||||||| || |||||||| || || | ||||||
Sbjct: 1030 ggatggataaataacattcaccatgacattggcacacatgttatacatcatctgtttcct 1089
Query: 1129 caaatccctcattatcactt 1148
|||||||| |||||||||||
Sbjct: 1090 caaatcccacattatcactt 1109
Score = 99.6 bits (50), Expect = 4e-20
Identities = 146/178 (82%)
Strand = Plus / Plus
Query: 437 tttggcctctgtattgggctgctcagggaacaatgttttgggctctgtttgttcttggcc 496
||||||| || || |||||||||||||| || |||||||||||| | |||||||| ||||
Sbjct: 398 tttggccgctctactgggctgctcagggtactatgttttgggctatctttgttctcggcc 457
Query: 497 atgattgtgggcatggaagcttttcgaacaatcccaagctaaatagtgttgttgggcacc 556
||||||| || ||||| |||||||| | | | ||| || | ||| || ||||| |
Sbjct: 458 atgattgcggccatggcagcttttccgatagcactctgctcaacaatgtggtggggcatc 517
Query: 557 ttcttcattcttcaattcttgtaccttatcatggatggagaattagccataggactca 614
| | |||||||| |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 518 tcttgcattcttcgattcttgtgccttatcatggatggagaatcagccataggactca 575