Jatropha Genome Database
- JcCB0008071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0008071.10 + phase: 0
(1143 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28179.m000461 transcription factor, putative 882 0.0
30170.m013613 Auxin-responsive protein IAA19, putative 184 8e-46
30146.m003546 Auxin-responsive protein IAA27, putative 84 2e-15
29844.m003174 Auxin-responsive protein IAA7, putative 76 5e-13
29841.m002748 Auxin-induced protein AUX22, putative 74 2e-12
29883.m001993 Auxin-induced protein AUX28, putative 74 2e-12
29598.m000460 Auxin-responsive protein IAA16, putative 66 5e-10
29883.m001992 Auxin-induced protein 22E, putative 66 5e-10
29912.m005483 Auxin-responsive protein IAA27, putative 64 2e-09
29844.m003175 Auxin-responsive protein IAA4, putative 56 5e-07
30076.m004546 Auxin-responsive protein IAA20, putative 54 2e-06
>28179.m000461 transcription factor, putative
Length = 1149
Score = 882 bits (445), Expect = 0.0
Identities = 971/1149 (84%), Gaps = 6/1149 (0%)
Strand = Plus / Plus
Query: 1 atgtctccacctctgttgggtgtggaggaggaaggggagaacaatgtctctttagtggcc 60
||||||||||||||||||||||| ||||| | ||| | | ||| |||||||||||||||
Sbjct: 1 atgtctccacctctgttgggtgttgaggatggggggcaaagcaaagtctctttagtggcc 60
Query: 61 tcttcgccttccattgattgtatctcacaaaatggctgcggtttaacagagcggaactat 120
||||| ||||| | |||||||| || || ||||||||| | |||| |||||| ||||||
Sbjct: 61 tcttcaccttctgtggattgtatatcccagaatggctgcaggttaaaagagcgtaactat 120
Query: 121 ttgggtttatcagattgttcttcagttgacagttctgctgtcccaagtttatcaaaggag 180
||||||| || |||||||||||||||||||| ||||| || ||||| ||||| |||||
Sbjct: 121 ctgggtttgtctgattgttcttcagttgacagctctgcagtaccaagcttatctgaggag 180
Query: 181 actaagaacaatctaaatttaaaggctactgagttgagacttggccttcctggatcccaa 240
| || |||||||| ||| ||||||||||||||||||| ||||| |||||||| |||| |
Sbjct: 181 aacaataacaatctcaatctaaaggctactgagttgaggcttggtcttcctgggtcccta 240
Query: 241 tctcctgaaagagaaacagatgtttcgttgctaagtacagggaagcttgatgagaagcct 300
|||||||||||||| ||||| ||||| ||||| | ||||||| |||||||||||||||
Sbjct: 241 tctcctgaaagagatacagaagtttccttgcttatatcagggaaacttgatgagaagcct 300
Query: 301 ctgtttcctttgcttcctttgaaagatgg------aatctgttcatcatcacagaagcat 354
||||||||||||||||| | |||||||| |||||| |||| |||| ||||||
Sbjct: 301 ttgtttcctttgcttcctctaaaagatgggcatggaatctgctcattgccacaaaagcat 360
Query: 355 gttgtttcaggcaacaaaagaggattttctgacaccatggatggattctctgaggtaaag 414
|||||||| || ||||||||||| || || || |||||||||||||| || ||||| ||
Sbjct: 361 gttgtttctggtaacaaaagaggcttctccgataccatggatggattttcagaggttaaa 420
Query: 415 ggttctgtgtattcagnnnnnnnctggttatttcactcggctgggacagatactgattct 474
|| |||| ||||||| ||| | ||||| ||||||||||| || ||||||||
Sbjct: 421 ggctctgcttattcagaaaagaattggctttttcattcggctgggactgagtctgattct 480
Query: 475 ctacaatctttgggacaagggaagttccccggtaattctgggataagtgcaatcttatca 534
| || ||| |||||||||||||||| ||||| ||||||||||| | |||| ||||
Sbjct: 481 cctcagtctgtgggacaagggaagttttccggtgcttctgggataaatacaatgctatct 540
Query: 535 tctaggccatctgtggcccaatcagccatgatgaaagaggttcccaagaaagtgttacag 594
||| |||| |||| | | || ||| || |||| |||||||| || | || |||||||||
Sbjct: 541 tctcggccttctgggcctcagtcaaccttgattaaagaggtggcccataatgtgttacag 600
Query: 595 gaccgatctcgtgctgccaatggaaccaacctcaaccaggctggtgtttctaacaatagc 654
|||||||||| ||||||||||| |||||| || |||||| ||||| ||||||| | ||
Sbjct: 601 gaccgatctcttgctgccaatgcaaccaaactgaaccagactggtacttctaaccacagt 660
Query: 655 agcagtgtccctgctgcgaaggcacaggttgttggttggcctccaattaagtcatttagg 714
| || | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggtagcgcccctgctgccaaggcacaggttgttggttggcctccaattaagtcatttagg 720
Query: 715 aagaacacattagctacctcttcaaagaacaatgatgaagttgatggaaaaccaggtctt 774
|||||||| || |||||| |||| ||||||||||| |||||||||||||||||||||| |
Sbjct: 721 aagaacactttggctaccacttcgaagaacaatgacgaagttgatggaaaaccaggtcct 780
Query: 775 ggtgctctttttatcaaggtcagcatggatggtgctccttatttaaggaaagtggatcta 834
||| |||| ||| ||||||||||||||||||| ||||||||||| |||| || ||||||
Sbjct: 781 ggtactctctttgtcaaggtcagcatggatggcgctccttatttgcggaaggtagatcta 840
Query: 835 agaacttactccacttatcaagaactctcttgtgctcttgagaagatgttcagttgtttt 894
|||||| | ||||| || |||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 841 agaactcattccacctaccaagaactctctcgtgctcttgagaagatgttcagctgtttt 900
Query: 895 accataggtcaatgtggatctcatggagctcctgggaaggaaaagctgagtgagattaaa 954
||||| ||||||||||||||||||||||| || | || |||||||||||| |||| |||
Sbjct: 901 accatcggtcaatgtggatctcatggagcaccagagagggaaaagctgagcgagagtaag 960
Query: 955 ttaagggatcttctgaatggatcagagtatgtgctaacatacgaggataaggatggcgat 1014
|| ||||| ||||||||||||||||| |||| || ||||| ||||| || ||||| ||
Sbjct: 961 ttgagggaccttctgaatggatcagaatatgcacttacatatgaggacaaagatggtgac 1020
Query: 1015 tggatgcttgttggggatgtgccatgggagatgtttattgatacatgcaagaggctaaag 1074
|||||||||||||||||||| |||||||||||||||||||| || ||||||||| |||||
Sbjct: 1021 tggatgcttgttggggatgtaccatgggagatgtttattgaaacgtgcaagaggttaaag 1080
Query: 1075 atcatgaagagctctgatgcgattgggttagctcctagagcaatggagaaatccaagata 1134
|||||||||||||||||||| ||||| |||||||| || ||||||||||||| ||||||
Sbjct: 1081 atcatgaagagctctgatgccattggattagctccgagggcaatggagaaattcaagatc 1140
Query: 1135 aaagcctag 1143
|| ||||||
Sbjct: 1141 aaggcctag 1149
>30170.m013613 Auxin-responsive protein IAA19, putative
Length = 1125
Score = 184 bits (93), Expect = 8e-46
Identities = 302/369 (81%), Gaps = 2/369 (0%)
Strand = Plus / Plus
Query: 727 gctacctcttcaaagaacaatgatgaagttgatggaaaaccaggtcttggtgctcttttt 786
|||||| | |||||||| | ||| ||||| ||||| ||| |||| | ||| ||| | |||
Sbjct: 673 gctaccgcgtcaaagaagactgaagaagtggatggtaaagcagggcctggggctttgttt 732
Query: 787 atcaaggtcagcatggatggtgctccttatttaaggaaagtggatctaagaacttactcc 846
||||||| |||||||||||||||||||| || |||||||| || | |||| |||||
Sbjct: 733 gtcaaggttagcatggatggtgctccttacttgaggaaagttgacttgagaaactactct 792
Query: 847 acttatcaagaactctcttgtgctcttgagaagatgttcagttgttttaccataggtcaa 906
| ||||| ||||| |||| ||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 793 gcatatcaggaactatcttctgcccttgagaagatgttcagctgctttactataggtcaa 852
Query: 907 tgtggatctcatggagctcctgggaag-gaaaagctgagtgagattaaattaagggatct 965
| |||| | |||||| ||| | ||||| |||| ||||||||| | || | | ||||||
Sbjct: 853 tatggagcacatggacctc-tcggaagagaaatgctgagtgaaagcaagctgaaggatct 911
Query: 966 tctgaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatgcttgt 1025
|| |||| ||||| ||||| || || || || ||||| ||||| || |||||||||||
Sbjct: 912 acttcatggctcagaatatgttctcacttatgaagataaagatggtgactggatgcttgt 971
Query: 1026 tggggatgtgccatgggagatgtttattgatacatgcaagaggctaaagatcatgaagag 1085
||| ||||| |||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct: 972 tggcgatgttccatgggagatgtttactgatacatgcaagaggctgagaatcatgaagag 1031
Query: 1086 ctctgatgc 1094
|||||||||
Sbjct: 1032 ctctgatgc 1040
Score = 60.0 bits (30), Expect = 3e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 344 cacagaagcatgttgtttcaggcaacaaaagaggattttctgacaccatggatggattct 403
||||||| ||||||||||||||||||||||||| || ||||| | |||||||| ||||
Sbjct: 344 cacagaaaaatgttgtttcaggcaacaaaagagggttctctgatgctatggatgggttct 403
Query: 404 ctgagg 409
| ||||
Sbjct: 404 cagagg 409
>30146.m003546 Auxin-responsive protein IAA27, putative
Length = 1122
Score = 83.8 bits (42), Expect = 2e-15
Identities = 144/178 (80%)
Strand = Plus / Plus
Query: 955 ttaagggatcttctgaatggatcagagtatgtgctaacatacgaggataaggatggcgat 1014
|||| ||||||||| |||| || |||||||| || ||||| || |||||||| | |||
Sbjct: 934 ttaaaggatcttcttcatggttctgagtatgttctcacatatgaagataaggacagtgat 993
Query: 1015 tggatgcttgttggggatgtgccatgggagatgtttattgatacatgcaagaggctaaag 1074
|||||||||||||| ||||| || ||||||||||||| ||| ||||||| ||| || |
Sbjct: 994 tggatgcttgttggtgatgtcccctgggagatgtttactgaaacatgcaggagactcaga 1053
Query: 1075 atcatgaagagctctgatgcgattgggttagctcctagagcaatggagaaatccaaga 1132
|||||||| | || || || |||||| | ||||| || || |||||||||| |||||
Sbjct: 1054 atcatgaaaggttcagaggcaattgggcttgctccaagggccatggagaaatgcaaga 1111
>29844.m003174 Auxin-responsive protein IAA7, putative
Length = 546
Score = 75.8 bits (38), Expect = 5e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 979 gagtatgtgctaacatacgaggataaggatggcgattggatgcttgttggggatgtgcca 1038
|||||||||| ||| || || ||||||||||| || |||||||| || || ||||| |||
Sbjct: 382 gagtatgtgccaacctatgaagataaggatggagactggatgctcgtgggcgatgttcca 441
Query: 1039 tgggagatgtttattgatacatgcaa 1064
|||||||||||| ||||| |||||||
Sbjct: 442 tgggagatgtttgttgattcatgcaa 467
>29841.m002748 Auxin-induced protein AUX22, putative
Length = 585
Score = 73.8 bits (37), Expect = 2e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 997 gaggataaggatggcgattggatgcttgttggggatgtgccatgggagatgtttattgat 1056
||||| |||||||| || ||||||||||| || ||||| || ||||||||||||| ||
Sbjct: 424 gaggacaaggatggagactggatgcttgtgggagatgtcccctgggagatgtttacagag 483
Query: 1057 acatgcaagaggctaaagatcatgaagag 1085
|||||||||| |||| ||||||||||||
Sbjct: 484 tcatgcaagagactaaggatcatgaagag 512
>29883.m001993 Auxin-induced protein AUX28, putative
Length = 735
Score = 73.8 bits (37), Expect = 2e-12
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 961 gatcttctgaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatg 1020
|||||||| |||||| | || ||||| | ||| || || ||||||||||| || ||||||
Sbjct: 553 gatcttctcaatggaactgactatgttccaacttatgaagataaggatggtgactggatg 612
Query: 1021 cttgttggggatgtgccatgggagatgtttattgatacatgcaag 1065
|||||||||||||| || ||| |||||||| |||| ||||||||
Sbjct: 613 cttgttggggatgtcccgtggaagatgtttgttgaatcatgcaag 657
>29598.m000460 Auxin-responsive protein IAA16, putative
Length = 774
Score = 65.9 bits (33), Expect = 5e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 961 gatcttctgaatggatcagagtatgtgctaacatacgaggataaggatggcgattggatg 1020
|||||| ||||||| || || ||||| | ||| || || ||||||||||| || ||||||
Sbjct: 592 gatcttttgaatggttctgaatatgtcccaacttatgaagataaggatggagactggatg 651
Query: 1021 cttgttggggatgtgccatgggagatgtt 1049
||||| || |||||||||||||| |||||
Sbjct: 652 cttgtaggagatgtgccatgggaaatgtt 680
>29883.m001992 Auxin-induced protein 22E, putative
Length = 591
Score = 65.9 bits (33), Expect = 5e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 1006 gatggcgattggatgcttgttggggatgtgccatgggagatgtttattgatacatgcaag 1065
||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||||
Sbjct: 481 gatggcgattggatgcttgttggagatgtcccatggggtatgtttatttcctcatgcaag 540
Query: 1066 aggct 1070
|||||
Sbjct: 541 aggct 545
>29912.m005483 Auxin-responsive protein IAA27, putative
Length = 894
Score = 63.9 bits (32), Expect = 2e-09
Identities = 194/248 (78%)
Strand = Plus / Plus
Query: 877 aagatgttcagttgttttaccataggtcaatgtggatctcatggagctcctgggaaggaa 936
|||||||||||||| ||||| || ||||||||||| |||||||||| ||| | ||
Sbjct: 628 aagatgttcagttgctttacaattggtcaatgtggttctcatggagttcccagccgagat 687
Query: 937 aagctgagtgagattaaattaagggatcttctgaatggatcagagtatgtgctaacatac 996
|||||||||| | ||| | |||||| ||| |||| || || ||||| || || ||
Sbjct: 688 ggactgagtgagagtcgattgatggatctcctgcatggttctgaatatgtactcacctat 747
Query: 997 gaggataaggatggcgattggatgcttgttggggatgtgccatgggagatgtttattgat 1056
|| || || ||||| ||||||||||||||||| ||||| |||||| ||||||| | ||
Sbjct: 748 gaagacaaagatggtgattggatgcttgttggtgatgttccatggaagatgttcaccgac 807
Query: 1057 acatgcaagaggctaaagatcatgaagagctctgatgcgattgggttagctcctagagca 1116
|| || | |||||| | ||||||||| || || || || ||||| |||| || ||||||
Sbjct: 808 acttgtaggaggctgaggatcatgaaaagttcagaggcaattggcctagccccaagagca 867
Query: 1117 atggagaa 1124
||||||||
Sbjct: 868 atggagaa 875
>29844.m003175 Auxin-responsive protein IAA4, putative
Length = 576
Score = 56.0 bits (28), Expect = 5e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 997 gaggataaggatggcgattggatgcttgttggggatgtgccatgggagatgtttat 1052
||||| || ||||| || |||||||||||||| ||||| |||||||| ||||||||
Sbjct: 454 gaggacaaagatggtgactggatgcttgttggagatgttccatgggatatgtttat 509
>30076.m004546 Auxin-responsive protein IAA20, putative
Length = 528
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 983 atgtgctaacatacgaggataaggatggcgattggatgcttgttggggatgtgccatggg 1042
||||| ||||||| || |||||||| || || ||| || | ||||||||||| |||||||
Sbjct: 416 atgtgttaacatatgaagataaggaaggagactggttgatagttggggatgttccatggg 475
Query: 1043 agatgtt 1049
|||||||
Sbjct: 476 agatgtt 482