Jatropha Genome Database
- JcCB0008031.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0008031.30 - phase: 0
(942 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29950.m001178 syntaxin, arabidopsis thaliana, putative 674 0.0
29333.m001054 syntaxin, arabidopsis thaliana, putative 60 3e-08
>29950.m001178 syntaxin, arabidopsis thaliana, putative
Length = 942
Score = 674 bits (340), Expect = 0.0
Identities = 784/932 (84%)
Strand = Plus / Plus
Query: 11 taatgaccaaatccttcatcagttatgtagacctaaagaaggaagccatgaaagatctag 70
||||||| ||||| |||| ||| ||||| |||||||| || || ||||||| |||| | |
Sbjct: 11 taatgacaaaatctttcaccagctatgtggacctaaaaaaagaggccatgagagatttgg 70
Query: 71 aagctggacctgaccctgatgtggaaatggctaatgcatcaaataccatggatcagaacc 130
||||||| |||||||||||| | || ||||| |||||||| || |||||||||| ||||
Sbjct: 71 aagctggtcctgaccctgatttagagatggcaaatgcatcgaacaccatggatcgtaacc 130
Query: 131 ttggtttattccttgaagaagctgagattgtcaagaaggaaatgggatcaatccgcgaaa 190
||||| | || |||||||||||||||| ||||||||| ||||||| |||||| || ||
Sbjct: 131 ttggtctttttcttgaagaagctgagaatgtcaagaaagaaatggaatcaattcgtgatg 190
Query: 191 ttcttgacagtcttcaacaatccaatgaagaaagcaaatcattacacaaatcagaagctg 250
| || | | |||||||| |||| ||||||||||| |||||| | |||||| | || ||
Sbjct: 191 tactagtccgtcttcaagaatctaatgaagaaagtaaatcactgcacaaacctgaggcat 250
Query: 251 taaaatctctgcgcaatataatcaatgcagatattgttactgtactcaaaaaagcaagag 310
|||||| ||||| || | ||||||||||||||||||||||| | || || |||||||
Sbjct: 251 taaaattgctgcgaaacaagatcaatgcagatattgttactgtccaaaagaaggcaagag 310
Query: 311 ctatcagagctcaactagaagaaatggacagggctaatgaagctaacaggcgattatctg 370
|||||| |||| || |||||||||||| | || |||| |||||||||||| | || |
Sbjct: 311 ctatcaagactcagcttgaagaaatggaccgtgccaatgcagctaacaggcgcctttcag 370
Query: 371 cgtttaaagaaggaacaccaatttatagaaccagaattgcagtcaccaatggtttgagaa 430
||| |||||||||||||||||||||||||||||| ||||||| || |||||||| | |
Sbjct: 371 ggttcaaagaaggaacaccaatttatagaaccagagttgcagttactaatggtttacgca 430
Query: 431 aaaagttaaaagagctaatgatggattttcaaggattaaggcaaaaaatgatggctgagt 490
| ||| | || || || ||||||||||||||||| |||||||| ||||||||| | || |
Sbjct: 431 agaagctgaaggaacttatgatggattttcaagggttaaggcagaaaatgatgacagaat 490
Query: 491 ataaagaaactgtaggaagaagatattttacagttactggagaatatcctgatgaggaag 550
| ||||||||||| || || || ||||| |||||||| ||||| || || |||||||||
Sbjct: 491 acaaagaaactgttggtaggaggtatttcacagttaccggagagtacccagatgaggaaa 550
Query: 551 taattgaaaagataatttctgatgataacggaggtgaagagttcttgaaacgcgcaatcc 610
| ||||| ||||| || ||||||| || |||||||| ||||| |||||| | ||||| |
Sbjct: 551 tcattgacaagattatatctgatggcaatggaggtgaggagtttttgaaatgtgcaattc 610
Query: 611 aagagcatgggaaagggaaagtattggagacagtagtggaaatacaggataggcatgacg 670
| ||||||||||||||||| || || |||||||||||||| |||||||||||||||||||
Sbjct: 611 aggagcatgggaaagggaaggtgttagagacagtagtggagatacaggataggcatgacg 670
Query: 671 cagcaaaagagattgagaagagcttgttagaactgcaccaggtgttcttggatatggcag 730
| |||||||||||||||||||||||||| || ||||| || ||||| |||| ||||| |
Sbjct: 671 cggcaaaagagattgagaagagcttgttggagctgcatcaagtgtttctggacatggctg 730
Query: 731 ttatggtggaagcacaaggagagcaattggatgatattgagcatcatgtgttaaatgcta 790
| ||||| || || ||||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 731 tgatggtagaggctcaaggagagcagttggatgatattgagcatcatgttctgaatgcta 790
Query: 791 gtcattatgtgaaagatggtgcaaaagagctcaagactgctaaagattatcagagaagta 850
|||||||||| || |||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 791 gtcattatgttaaggatggtgccaaagagctcaagaccgctaaagattatcagaggggta 850
Query: 851 gcaggaagtggttgtgtattgggattatacttttgttgctgatcattcttgttattgtca 910
||||||||||| |||| ||||||||||||||||||||| | || ||||| || ||||| |
Sbjct: 851 gcaggaagtggatgtgcattgggattatacttttgttgattattattctggtgattgtta 910
Query: 911 tacctattgctactagttttagtcattcttga 942
|||||||||| ||||| |||||||||||||||
Sbjct: 911 tacctattgccactagctttagtcattcttga 942
>29333.m001054 syntaxin, arabidopsis thaliana, putative
Length = 1047
Score = 60.0 bits (30), Expect = 3e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 703 ctgcaccaggtgttcttggatatggcagttatggtggaagcacaaggagagcaattggat 762
||||| || ||||||||||| |||||||| ||||| |||| ||||| ||||||||||||
Sbjct: 679 ctgcatcaagtgttcttggacatggcagtattggtgcaagctcaaggtgagcaattggat 738
Query: 763 ga 764
||
Sbjct: 739 ga 740