Jatropha Genome Database
- JcCB0008031.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0008031.20 + phase: 0
(1446 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29950.m001179 conserved hypothetical protein 1142 0.0
>29950.m001179 conserved hypothetical protein
Length = 1455
Score = 1142 bits (576), Expect = 0.0
Identities = 1139/1326 (85%), Gaps = 3/1326 (0%)
Strand = Plus / Plus
Query: 121 gtgttgaaaattttgcctaatagcagaaagtcaagaagacatgttcagttgataagaagt 180
||||||| | |||| || || ||||||||||||||| |||||||||||| || | |
Sbjct: 133 gtgttgagatttttccccaaaagcagaaagtcaagat---atgttcagttgaagagtact 189
Query: 181 tataggaactattgtggacttgtgctaagatgctcacatcaattctctggctggacaaat 240
||||||| ||| |||| ||| | |||||||||| |||| ||||| |||||||| ||
Sbjct: 190 cataggaattatcgtgggcttcagttaagatgctcgcatcggttctcaggctggactaag 249
Query: 241 aagtttccctcatttagtagtactgctgcgagtataaataaggcaaaagaagtgcttaat 300
||||| ||||||| |||| |||| ||| ||||||| ||||| ||| |||| || ||
Sbjct: 250 aagttgtcctcattgtgtagcactggtgcaagtataactaaggtaaacgaagccgttgat 309
Query: 301 tttctgatgttgagtgtgtcaaacaacctaaaagaaaagggccagttgcagttcttgaaa 360
|| |||||| | | ||||||||||| ||| || | || | ||| || ||| ||||||||
Sbjct: 310 ttcctgatgattaatgtgtcaaacagcctgaaggtaaggagccgcttccagctcttgaaa 369
Query: 361 gttgccggcatattggcatgtgccctgttagtcattccatcggctgatgctgttgatgct 420
||||| |||||| ||||||| || | ||| |||||||||| ||||||||||||||||||
Sbjct: 370 gttgctggcatactggcatgcgcattattaatcattccatcagctgatgctgttgatgct 429
Query: 421 ctcaaaacttgtgcttgcttgttgaaggagtgcaggttagaattggctaaatgcattgca 480
|||||||| ||| ||||||| ||||||||||||||| ||||||||| || |||||||||
Sbjct: 430 ctcaaaacatgtacttgcttattgaaggagtgcaggctagaattggtcaagtgcattgca 489
Query: 481 aacccagcatgtgctgccaatatcgcttgccttcagacatgcaataatcggcctgatgag 540
|| ||||||||||||||||| | ||||| |||||||| |||||||| ||||||||||||
Sbjct: 490 aatccagcatgtgctgccaacgttgcttgtcttcagacctgcaataaccggcctgatgag 549
Query: 541 actgaatgtcagattaaatgtggggacttgtttgaaaacaatgttgttgatgaattcaat 600
|||||||| ||||| ||||| || ||||||||| |||||| ||||||||| |||||||||
Sbjct: 550 actgaatgccagatcaaatgcggagacttgtttcaaaacagtgttgttgacgaattcaat 609
Query: 601 gagtgtgcagtctcaagaaagaagtgtgtacctaaaaaatctgatgttggggaatttcca 660
||||||||||||||| ||||||||||||||||| | |||||||||||||| || |||||
Sbjct: 610 gagtgtgcagtctcacgaaagaagtgtgtacctcagaaatctgatgttggtgactttcct 669
Query: 661 gtccctgatccagctgttctagtcaaaagctttaacattgcagatttcagtggaaagtgg 720
||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct: 670 gtccctgatcctgctgtacttgtcaaaagctttaacattgcagatttcagtgggaagtgg 729
Query: 721 ttcattactagtggcctaaatcctacattcgatacttttgactgccaattacatgatttc 780
|| ||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 730 tttattactagtggcctaaatcctaccttcgatacttttgattgccaattgcatgaattc 789
Query: 781 catagagagtctaacagactcgtaggaaatttgtcatggagaatacgaactccagatggt 840
|||| ||| ||| ||| ||| || |||||| | |||||||||| ||||||| |||| ||
Sbjct: 790 catacagaatctgacaaacttgtgggaaatctaacatggagaattcgaactctagatagt 849
Query: 841 ggctttttcactcgatcaactgtgcagaagtttgttcaagatccattgcagcctggaata 900
||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| |||
Sbjct: 850 ggctttttcactcgatcggctgtgcagaggtttgttcaagatcctgtgcagcctgggata 909
Query: 901 ctctacaaccacgataatgagtatcttcattatcaagacgattggtatatattgtcctcc 960
|||||||| || || ||||||| ||||||||||||||| ||||||||||| ||||| |||
Sbjct: 910 ctctacaatcatgacaatgagtttcttcattatcaagatgattggtatattttgtcgtcc 969
Query: 961 aagctagaaaacagcgagaatgattacatatttgtgtattacagaggcaggaatgatgct 1020
||| ||||||| ||| | ||||||| |||| ||||| || | |||| |||||||||
Sbjct: 970 aagatagaaaatagcaatgatgattatgtattcgtgtactatcggggcaagaatgatgca 1029
Query: 1021 tgggatggatatggtggtgccgttgtgtacacaagaagtgcagttttaccggaaagcatc 1080
|||||||||||||||||||| ||||| || ||||||||||||||||| || |||||||||
Sbjct: 1030 tgggatggatatggtggtgctgttgtatatacaagaagtgcagttttgccagaaagcatc 1089
Query: 1081 atacctgaattggaaacagcagctaaaaaggtaggacgagatttcaacaagtttattata 1140
||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 1090 atacctgaactggaaagagcagctaaaagcgtaggacgagatttcaacaagtttattaga 1149
Query: 1141 acagataatacttgtgggcctgagcctccccttgctgagagaatagagaagacggtagag 1200
||||||||||||||||| |||||||||||||||| ||||||| ||||||| || ||||||
Sbjct: 1150 acagataatacttgtggacctgagcctccccttgttgagagactagagaaaacagtagag 1209
Query: 1201 gaaggggaaaagaccattataagagaggttgaagaaattgaagggaacgtagagaaggtg 1260
|||||||| |||||||||||| | |||||||| |||||||||||| | |||||||||||
Sbjct: 1210 gaaggggagaagaccattatacgggaggttgaggaaattgaaggggaggtagagaaggtt 1269
Query: 1261 ggaaaaacagaaatggccctgtttcagagattggcagaagggtttaaagagctgcaacaa 1320
|| || || |||||| || |||| |||||||||||||||||| |||||||||| ||||||
Sbjct: 1270 gggaagaccgaaatgaccttgttgcagagattggcagaagggcttaaagagctccaacaa 1329
Query: 1321 gatgaagaatttttcgtgagagagctaagtaaggaagagatggatatattgaatgatcta 1380
||||| ||||||||| |||| ||||||||||| ||||| | ||||||||||||| |
Sbjct: 1330 gatgaggaatttttcctgagggagctaagtaaagaagaaaaagatatattgaatggattg 1389
Query: 1381 aaaatggaagcaggtgaagtggaaaaactctttggcgaagcattgcctcttaggaaatta 1440
||||||||||| ||| ||||||||||||||||| | ||||||||| | |||||||||
Sbjct: 1390 caaatggaagcaactgaggtggaaaaactctttgggggagcattgccattaaggaaatta 1449
Query: 1441 agatag 1446
||||||
Sbjct: 1450 agatag 1455