Jatropha Genome Database
- JcCB0006821.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0006821.20 + phase: 0 /partial
(816 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013886 histone deacetylase 1, 2 ,3, putative 835 0.0
29659.m000144 histone deacetylase 1, 2 ,3, putative 82 6e-15
29791.m000547 histone deacetylase 1, 2 ,3, putative 52 5e-06
>30147.m013886 histone deacetylase 1, 2 ,3, putative
Length = 1407
Score = 835 bits (421), Expect = 0.0
Identities = 658/737 (89%)
Strand = Plus / Plus
Query: 1 cgtgtcctgtatgttgatattgatgtccatcatggtgatggtgttgaggaggcattctat 60
|||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 544 cgtgtcctatatgttgatattgatgtccaccatggagatggcgttgaggaggcattctat 603
Query: 61 actactgacagggtcatgacagtctcttttcataaatttggagatttctttccaggaaca 120
||||| |||||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct: 604 actaccgacagggtcatgacggtgtcttttcataaatttggagatttctttccagggaca 663
Query: 121 ggccacataaaggacactggtgctggccaagggaagaactatgccctgaatattccatta 180
|| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 664 gggcacataaaggatactggtgctggtcaaggcaagaattatgccctgaatatcccattg 723
Query: 181 aacgatgggatggatgatgaaagtttccgcggtcttttccggcccatcatccaaaaagtc 240
|| || ||||||||||||| |||||| || | |||||| ||||||||||||||||||||
Sbjct: 724 aatgacgggatggatgatgtaagttttcgtgctctttttcggcccatcatccaaaaagtt 783
Query: 241 atggaaatttatcagcctgatgcggttgttctccaatgtggagcagattcactatctggt 300
||||| |||||||||||||||| |||||||||||||| ||||||||||| | |||||
Sbjct: 784 atggaggtttatcagcctgatgctgttgttctccaatgcggagcagattctttgactggt 843
Query: 301 gataggttgggctgcttcaacctgtctgtgaagggccatgctgattgccttcgttttctt 360
||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 844 gataggttggggtgcttcaacttgtctgtgaagggccatgcagattgccttcgttttctt 903
Query: 361 agatcttttaatgttcctcttatggtcttgggtggcgggggatatactataaggaatgtt 420
|| ||||| ||||||||||| ||||| |||||||| || ||||||||||| | ||||||
Sbjct: 904 aggtctttcaatgttcctctgatggttttgggtggtggcggatatactatccgaaatgtt 963
Query: 421 gcccgttgctggtgctatgagacagcaattgcagttggggtggaacctgataataaattg 480
||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||
Sbjct: 964 gcccgttgctggtgctatgagacggcagttgcagttggggtagaaccggataataaattg 1023
Query: 481 ccatacaatgagtattatgagtactttggccctgactacacgcttcacattgaaccatct 540
|| |||||||| || |||||||||||||| || || ||||| |||||||| || ||||||
Sbjct: 1024 ccttacaatgaatactatgagtactttggtccagattacacacttcacatagatccatct 1083
Query: 541 aacatggagaacctaaactcgcccaaagatatggagagaataaggaacatattactggag 600
|||||||||||||||||||| || |||||||||||||| |||||||||||| |||| |||
Sbjct: 1084 aacatggagaacctaaactcaccaaaagatatggagaggataaggaacatactactagag 1143
Query: 601 caactttctaaactgcccaatgcacctagtgtaccttttcagacaacaccacccactact 660
|||||||||||||| || |||||||| ||||| |||||||||||||||||| ||| ||
Sbjct: 1144 caactttctaaactccctaatgcacccagtgtgccttttcagacaacaccagccataacc 1203
Query: 661 gaagttccggaagagcctgaagaggatatggatcgaagacctaaacgacgcatatggaat 720
|||||||| |||||| ||| ||||| |||||||||||||||||||| ||||| ||| ||
Sbjct: 1204 gaagttccagaagagggtgacgaggaaatggatcgaagacctaaacgccgcatttgggat 1263
Query: 721 ggtgaggattatgagtc 737
|| |||| |||||||||
Sbjct: 1264 ggcgagggttatgagtc 1280
>29659.m000144 histone deacetylase 1, 2 ,3, putative
Length = 1368
Score = 81.8 bits (41), Expect = 6e-15
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 10 tatgttgatattgatgtccatcatggtgatggtgttgaggaggcattctatactactgac 69
|||||||||||||| | || ||||||||||| || || ||||| || || ||||||||
Sbjct: 406 tatgttgatattgacattcaccatggtgatggcgtagaagaggcgttttacactactgat 465
Query: 70 agggtcatgacagtctcttttcataaatttggagatttctttccaggaacagg 122
||||| ||||| || || ||||||||||||||||||| |||||||| |||||
Sbjct: 466 agggtaatgacggtttcatttcataaatttggagattattttccaggtacagg 518
>29791.m000547 histone deacetylase 1, 2 ,3, putative
Length = 1290
Score = 52.0 bits (26), Expect = 5e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 14 ttgatattgatgtccatcatggtgatggtgttgaggaggcattctatactactgacaggg 73
||||||| || || ||||||||||||||||| || || || || ||| |||||||||||
Sbjct: 506 ttgatatagacgtgcatcatggtgatggtgtcgaagaagccttttattttactgacaggg 565
Query: 74 tcatgacagt 83
| ||||||||
Sbjct: 566 tgatgacagt 575