Jatropha Genome Database

JcCB0006421.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0006421.30 + phase: 0 /partial
         (701 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014171 E2F4,5, putative                                        254   6e-67

>30170.m014171 E2F4,5, putative
          Length = 1161

 Score =  254 bits (128), Expect = 6e-67
 Identities = 264/308 (85%), Gaps = 6/308 (1%)
 Strand = Plus / Plus

                                                                       
Query: 391 cttgatcctcagtctgccactcgcagtaagcgtatcaatagagcaaaggtttcaaaaaat 450
           |||||||||||||  | |||| |  ||||||||| || |||| |||||||| ||||||||
Sbjct: 292 cttgatcctcagtgcgtcactgggggtaagcgtaacagtagatcaaaggttccaaaaaat 351

                                                                       
Query: 451 ggtaaattggggattcaaggatcaaatgctgaatctcctaatggtctgaatccagcaact 510
           |  | ||  |||| ||||  ||||||||||||   || |||||| ||||||||||| |||
Sbjct: 352 gtcagatcagggagtcaaaaatcaaatgctga---tcttaatggactgaatccagccact 408

                                                                       
Query: 511 ggttgtcgatatgacagttccttaggcctgttgaccaggaaatttgtcaagttgattcag 570
           || ||||||||||||||||| |||||||| ||||| | |||||||||||||||||| |||
Sbjct: 409 ggctgtcgatatgacagttcgttaggcctattgactaagaaatttgtcaagttgatccag 468

                                                                       
Query: 571 gaggacaaggatggaacccttgatctgaacaggactgcagatgtgttggaggtagtccaa 630
           || | ||||||||| || |||||||| ||| | ||||||||||||||||||   ||||||
Sbjct: 469 gaagccaaggatggcacacttgatcttaaccgaactgcagatgtgttggag---gtccaa 525

                                                                       
Query: 631 aagaggaggatatatgatattacaaatgttttggaaggaatatcattgatagagaaaact 690
           |||||||||||||||||||||||||||||| |||||||||||  |||||||||||| |||
Sbjct: 526 aagaggaggatatatgatattacaaatgttctggaaggaatagaattgatagagaagact 585

                   
Query: 691 tcaaaaaa 698
           ||||||||
Sbjct: 586 tcaaaaaa 593