Jatropha Genome Database
- JcCB0006311.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0006311.10 + phase: 0
(1071 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29863.m001111 choline/ethanolamine kinase, putative 997 0.0
29686.m000858 choline/ethanolamine kinase, putative 125 6e-28
>29863.m001111 choline/ethanolamine kinase, putative
Length = 1071
Score = 997 bits (503), Expect = 0.0
Identities = 906/1039 (87%), Gaps = 1/1039 (0%)
Strand = Plus / Plus
Query: 30 aaggaatttccca-gaagaactaaagaaagttcttcaatcagtggcctctgaatggggag 88
|||| |||||||| ||||| ||||||||| |||||||||||||||| ||||| |||||||
Sbjct: 29 aagggatttcccaagaagagctaaagaaaattcttcaatcagtggcatctgagtggggag 88
Query: 89 atgtggtggatgatatgaattctttgcaggttataccattaaaaggagctatgactaatg 148
||||||| ||||||||| | ||||||||||||| ||||| || ||||||||||||||||
Sbjct: 89 atgtggttgatgatatggaagctttgcaggttatgccattgaagggagctatgactaatg 148
Query: 149 aggttttccaaataaattggcctacaaagaatggtgatattattcgaaaattgttgattc 208
||||||| || |||||||||||||||| || ||||||| ||||| | |||||| ||||||
Sbjct: 149 aggtttttcagataaattggcctacaaggagtggtgatgttattaggaaattgctgattc 208
Query: 209 ggatttatggtgaaggtgttgaaatgtttttcaggagagatgatgagattaggacttttg 268
||||||||||| ||||||||||| | || || | || ||||||||||||||||||||||
Sbjct: 209 ggatttatggtaaaggtgttgaagttttctttaaaagggatgatgagattaggacttttg 268
Query: 269 aatgtatgtcaaagaatggacaagggcctaggcttcttggccggtttgcagatggcagag 328
| |||||||||||| ||||||||||||| || ||||||||||| ||||| |||||||| |
Sbjct: 269 agtgtatgtcaaagcatggacaagggcccagacttcttggccgatttgctgatggcaggg 328
Query: 329 ttgaagagttcattcatgctaggacactatcagctgctgacctccgtgatcctgaaatat 388
||||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |
Sbjct: 329 ttgaagagttcattcatgccaggacactgtcggctgctgacctccgtgatcctgaaattt 388
Query: 389 ctgctctagtggcagaaaagatgagagaattccacgatcttgatatgcctggtccaaaga 448
|||||||||| |||| |||||||||||||||||| ||| | ||||||||||| || | ||
Sbjct: 389 ctgctctagtagcagcaaagatgagagaattccatgatttagatatgcctggccctagga 448
Query: 449 aagtactactatggagcagaatgagggattggctggctgaggcaaaatgtttgtgttctg 508
| ||||| || ||||||||||||||| |||||||| | |||| || |||||||||||
Sbjct: 449 atgtactcctgtggagcagaatgaggaattggctgaccaaggccaagcatttgtgttctg 508
Query: 509 cgaaagatgcaaagcaatttcatttggatagtctagaagatgaaatcaatatgctagaga 568
| |||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||
Sbjct: 509 caaaagatgcaaagaaatttcacttggactgtctaggagatgaaatcaatatgctagaga 568
Query: 569 agcaactgtcacaagaatatcaggaaataagattttgtcacaatgacctgcaatatggta 628
|||| || ||||||||| |||||| || | ||||||||||||||||||||||||||||
Sbjct: 569 agcagctttcacaagaagttcaggatattgggttttgtcacaatgacctgcaatatggta 628
Query: 629 acataatgatggatgaagagacaagatcaatcaccataattgactatgagtattcaagtt 688
| || ||||||||||||||||| |||||||||||||||||||| ||||||||| | ||||
Sbjct: 629 atatcatgatggatgaagagacgagatcaatcaccataattgattatgagtatgcgagtt 688
Query: 689 acaatcctgttgcatatgacattgcaaaccacttctgtgaaatggtagctgattatcatt 748
|||||||| ||||||||||||||||||| ||||| |||||||||| ||| |||||||||
Sbjct: 689 acaatcctattgcatatgacattgcaaatcacttttgtgaaatggcagcaaattatcatt 748
Query: 749 ctgatacaccacatattctggactatagcagatatccaggattagaggagcgctgcagat 808
|||| ||||||||| || |||||||||||| |||||| ||||| || |||||| ||||||
Sbjct: 749 ctgagacaccacatgttttggactatagcaaatatcctggattggaagagcgccgcagat 808
Query: 809 ttgttcgtgcatatctaagttcagcaggtgagaaacctagtgaagatgaagtggaacagc 868
|||||| || |||||||| ||| | ||| | ||||| |||||||| ||||||||| ||
Sbjct: 809 ttgttcatgtatatctaaattctggaggcaaaaaacccagtgaagacaaagtggaacggc 868
Query: 869 tagtcaatgatgcagagaagtatactctagcaaaccatctcctttggggcttatggggaa 928
| |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||
Sbjct: 869 tgactgatgatgcagagaagtacactcttgcaaaccatctcttttggggcttatggggaa 928
Query: 929 taatttcaggttatgtaaacacactagattttgactacttggagtatgcaagggagaggt 988
|||| ||||||||||| || | ||| |||||||| ||| |||||||||| ||| ||||||
Sbjct: 929 taatctcaggttatgtcaataaacttgattttgattacatggagtatgctaggcagaggt 988
Query: 989 ttgagcagtattggttgagaaagcatgaattattgggatcctttgatgttcaagctaatg 1048
|||||||||||||| |||||||| |||| | |||||||||| || |||||| || ||||
Sbjct: 989 ttgagcagtattgggtgagaaaggctgaagtcttgggatcctctggtgttcatgcaaatg 1048
Query: 1049 gttatgtagttgatgctac 1067
| |||||||| ||||||||
Sbjct: 1049 gctatgtagtagatgctac 1067
>29686.m000858 choline/ethanolamine kinase, putative
Length = 999
Score = 125 bits (63), Expect = 6e-28
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 619 caatatggtaacataatgatggatgaagagacaagatcaatcaccataattgactatgag 678
|||||||||||||| ||||| ||||||||||| | | |||| |||||||| || |||||
Sbjct: 619 caatatggtaacatcatgattgatgaagagactaaagcaataaccataatagattatgaa 678
Query: 679 tattcaagttacaatcctgttgcatatgacattgcaaaccacttctgtgaaatggtagct 738
|||||||||||||||||| |||| | ||| || ||||||||||||||||| |||| ||
Sbjct: 679 tattcaagttacaatcctattgcctttgatatagcaaaccacttctgtgagatggccgcc 738
Query: 739 gattatcattctgatacaccacatattctggacta 773
|| ||||| ||| ||||||| |||||| |||||||
Sbjct: 739 gactatcactctaatacacctcatattatggacta 773
Score = 71.9 bits (36), Expect = 8e-12
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 247 gatgatgagattaggacttttgaatgtatgtcaaagaatggacaagggcctaggcttctt 306
||||||||||| | ||||||||||| ||||| ||| | || ||||| ||| ||||||||
Sbjct: 250 gatgatgagatcaagacttttgaattcatgtctaagcaagggcaaggccctcggcttctt 309
Query: 307 ggccggtttgcagatggcagagttgaagagttcattcatgctaggacactatcagc 362
|| ||||| || |||| || | ||||||||||| |||||| |||||||||||||
Sbjct: 310 gggcggttctcaaatgggcgaatcgaagagttcatacatgctcggacactatcagc 365
Score = 58.0 bits (29), Expect = 1e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 112 ttgcaggttataccattaaaaggagctatgactaatgaggttttccaaataaattggcct 171
|||||| ||||||| | ||||| || ||||||||||||||||| |||||||| |||||
Sbjct: 115 ttgcagattatacctcttaaaggtgcaatgactaatgaggtttttcaaataaagtggcca 174
Query: 172 acaaa 176
|||||
Sbjct: 175 acaaa 179