Jatropha Genome Database

JcCB0005461.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0005461.20 - phase: 0 
         (513 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000794 calcium ion binding protein, putative                   151   5e-36
30008.m000795 calcium ion binding protein, putative                    70   1e-11

>30008.m000794 calcium ion binding protein, putative
          Length = 552

 Score =  151 bits (76), Expect = 5e-36
 Identities = 340/428 (79%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagagatatcggagacggcaaaagcttattatgctaacgtatcagaaaagcagaag 60
           ||||| |||||||| ||||| || |||||||| || || ||| | ||||| | |||||||
Sbjct: 1   atggaggagatatcagagactgctaaagcttactacgcaaacttgtcagacaggcagaag 60

                                                                       
Query: 61  cgattagcgaaagatctcttcaacgaaatggataaagatggagatggaaaaattactttc 120
           ||| | | ||||||  | ||| | | |||||||| |||||||||||| ||||| ||  ||
Sbjct: 61  cgacttgggaaagaatttttccaagcaatggatacagatggagatggcaaaatcacgctc 120

                                                                       
Query: 121 gatgaatatgaacaatatatcaagcacaagaaaggttataaaacaatttccactcctgat 180
           || || ||||  || |  || ||  | |||||||| |  |||||||||||  ||||||||
Sbjct: 121 gaagagtatgcgcagtgcattaaagaaaagaaagggttcaaaacaatttcttctcctgat 180

                                                                       
Query: 181 ttctttaaaaagtttgatgaggatggaaatggcacattggatttcgatgaaattgtgact 240
           |||||||||||| | ||  | |||||||| || ||  ||||||| |||||| || | |  
Sbjct: 181 ttctttaaaaagctagacaaagatggaaacgggacgctggattttgatgaatttatcatc 240

                                                                       
Query: 241 gtacactacatatgcgcaagccaaagaattttcttttgtgacgagtgcagggtctttctt 300
           || |||||||||||| | | | ||||| ||| ||||||||| ||||| |  || ||||| 
Sbjct: 241 gttcactacatatgctccaccgaaagagtttacttttgtgatgagtgtaaagtatttcta 300

                                                                       
Query: 301 gatggtgtctatttcacttgtgtccagtgcttcaatggctctgggaatacttatgatctc 360
           | ||| || || |||||||| || |||||||||||||||||||| |||||||| ||||| 
Sbjct: 301 gctggagtttacttcacttgcgttcagtgcttcaatggctctggtaatacttacgatctt 360

                                                                       
Query: 361 tgtatttcttgctatcgcgataaagatattaatcatcataaggatgctttgtttcttgat 420
           ||   |||||| ||||| |||||  |||| || ||||||||||||||| |||||||||||
Sbjct: 361 tgctcttcttgttatcgtgataagaatatcaaccatcataaggatgctctgtttcttgat 420

                   
Query: 421 aattacac 428
           ||||||||
Sbjct: 421 aattacac 428


>30008.m000795 calcium ion binding protein, putative
          Length = 423

 Score = 69.9 bits (35), Expect = 1e-11
 Identities = 106/127 (83%), Gaps = 2/127 (1%)
 Strand = Plus / Plus

                                                                       
Query: 87  aatggataaagatggagatggaaaaattactttcgatgaatatgaacaatatatcaagca 146
           |||||||| |||||||||||| ||||| | |||||| || |||||||| ||||| ||| |
Sbjct: 87  aatggatacagatggagatggcaaaatcagtttcgaagagtatgaacagtatattaag-a 145

                                                                       
Query: 147 caag-aaaggttataaaacaatttccactcctgatttctttaaaaagtttgatgaggatg 205
           |||| ||||| | |||||||||| |  ||||||||||||| |||||| | ||  | ||||
Sbjct: 146 caaggaaagggtttaaaacaattacttctcctgatttcttcaaaaagctagacaaagatg 205

                  
Query: 206 gaaatgg 212
           |||||||
Sbjct: 206 gaaatgg 212