Jatropha Genome Database
- JcCB0005461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0005461.10 - phase: 0 /pseudo/partial
(1490 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30008.m000793 ATP binding protein, putative 1086 0.0
>30008.m000793 ATP binding protein, putative
Length = 2814
Score = 1086 bits (548), Expect = 0.0
Identities = 827/920 (89%)
Strand = Plus / Plus
Query: 269 ttttggatgataaggatctttcccacataatctggtggaaggagaggctgcagcagtgca 328
|||||| |||||||||||| || ||||| ||||||||||||||||||||||| |||||||
Sbjct: 221 ttttgggtgataaggatctctctcacattatctggtggaaggagaggctgcatcagtgca 280
Query: 329 ggaagccttctaccattcagctggttaaaaggcttatgtattccaatttgcttggcttgg 388
||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 281 ggaagccttctactgttcagcttgttaaaaggcttatgtattcgaatttgcttggcttaa 340
Query: 389 atgttaacttgaaaaacgggagtctaaaagaaggaaacctcaattgggagatgttgcagt 448
|||| | || ||||| |||||||| ||||| ||||| ||||||||||||||| ||||||
Sbjct: 341 atgtcgagttaaaaaatgggagtctgaaagatggaaatctcaattgggagatgctgcagt 400
Query: 449 tcaagtccaagtttccacgtgaggttttactctgcagagttggagatttttatgaagcaa 508
||||||| |||||||||||||||||||| || ||||||||||| || |||||||||||||
Sbjct: 401 tcaagtcaaagtttccacgtgaggttttgctttgcagagttggggacttttatgaagcaa 460
Query: 509 ttggaatagatgcttgttttcttgttgaatatgctggtttgaatccttttggtgggttga 568
| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 461 taggaatagatgcttgtattcttgttgaatatgctggtttaaatccttttggtgggttac 520
Query: 569 gatcagatagcattcctagagctggctgccctgttgtgaaccttcggcaaactttagatg 628
| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 521 gcacagatagcgttcctagagctggctgccctgttgtgaatcttcggcaaactttagatg 580
Query: 629 acttgacacgaaacgggtattctgtgtgcatagtggaggaagtacaaggtccaacacagg 688
|||||||||| || |||||||||||||||||||||||||| || || ||||||||||| |
Sbjct: 581 acttgacacgtaatgggtattctgtgtgcatagtggaggaggttcagggtccaacacaag 640
Query: 689 cccgctcacgtaaaagccggtttatatctgggcatgcacatccaggcagtccatatgttt 748
| ||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||| |
Sbjct: 641 ctcgctctcgtaaaggccggtttatatctgggcatgcacatccaggcaatccgtatgtat 700
Query: 749 ttggacttgtgggggttgaccatgatcttgacttcccagaaccaatgcccgtggttggaa 808
||||||||| |||||||| |||||||||||||| |||||||| ||||| || ||||| |
Sbjct: 701 ttggacttgctggggttgatcatgatcttgactttccagaaccgatgcctgtagttggga 760
Query: 809 tatcacgttctgcaaggggttattgcatagtctcagtcttagaggctatgaagacatatt 868
|||| ||||||||||| |||||||||||||| || ||||||||| ||||||| |||||||
Sbjct: 761 tatctcgttctgcaagtggttattgcatagtttctgtcttagagactatgaaaacatatt 820
Query: 869 cattagaagatggtcttactgaagaggctttagttgccaagcttcgtacatgtcgctacc 928
||| ||| |||||||||||||| |||||||||||| ||||||||||||| ||||||||||
Sbjct: 821 catcagaggatggtcttactgaggaggctttagttaccaagcttcgtacttgtcgctacc 880
Query: 929 atcatctatttcttcatacatctttaagaaacaattcctcaggaacttgtcgttggggag 988
||||||||||||||||| ||||||||||| |||||||||||||||| || ||||||||||
Sbjct: 881 atcatctatttcttcatgcatctttaagacacaattcctcaggaacctgccgttggggag 940
Query: 989 aatttggcgagggtggccttttatggggagaatgcagcaccagacactttgaatggtttc 1048
|||||||||||||||| || || ||||||||||||| ||||||| ||||||||||||
Sbjct: 941 aatttggcgagggtggactattgtggggagaatgcaatgccagacattttgaatggtttg 1000
Query: 1049 aaggcaatcctgtcactgagcttttgtttaaggtcagggagctttatggtcttgaaaatg 1108
||||| ||||| |||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 1001 aaggcgatcctttcactgagctcctgtttaaggttagggagctttatggtcttgatgatg 1060
Query: 1109 gagttgctttcagaaatgtcactgtgccttcagaaaataggccccattcattgcaccttg 1168
|| || | ||||||||||||||||| |||||||| |||||||||| | || |||||||||
Sbjct: 1061 gaattacattcagaaatgtcactgttccttcagataataggccccgtccactgcaccttg 1120
Query: 1169 gaacagcaacgcaaattggt 1188
|||||||||| |||||||||
Sbjct: 1121 gaacagcaacacaaattggt 1140
Score = 127 bits (64), Expect = 2e-28
Identities = 167/204 (81%), Gaps = 13/204 (6%)
Strand = Plus / Plus
Query: 1271 ggtgtcataccaacagaaggaataccttgtttattgaaggtattgcttccatcaaattgc 1330
|||| ||||||||||||||||||||||||||| |||||||| || || ||||| ||||||
Sbjct: 1138 ggtgccataccaacagaaggaataccttgtttgttgaaggtgttactaccatccaattgc 1197
Query: 1331 tcag-------------atatgtgagagatcttcttctgaatcctcctgcttatgaaatt 1377
| | |||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 1198 actggtctacctgtattatatgtgagagatcttttgctgaaccctcctgcttatgaaatt 1257
Query: 1378 gcatccaccattcaagcaatatgcaaacttatgagcaatgttacgtgctctatcccagaa 1437
||||| || |||||||||| |||||| |||||||||| | || || || |||||||||
Sbjct: 1258 gcatcaacaattcaagcaacatgcaagcttatgagcagcataacatgttcgatcccagaa 1317
Query: 1438 tttacttgtgtttcatctgcaaag 1461
|||||||| ||||||||||||||
Sbjct: 1318 tttacttgcatttcatctgcaaag 1341