Jatropha Genome Database
- JcCB0005331.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0005331.10 - phase: 0
(1107 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014152 conserved hypothetical protein 220 1e-56
29813.m001457 hypothetical protein 90 3e-17
>30147.m014152 conserved hypothetical protein
Length = 1158
Score = 220 bits (111), Expect = 1e-56
Identities = 261/311 (83%)
Strand = Plus / Plus
Query: 274 agaccctccaaggaccgtcatacgaaggtggaaggccgtggccgtaggatccgtatgcct 333
||||| ||||||||| | || || ||||| ||||||||||| |||||||||||||||||
Sbjct: 268 agaccatccaaggacagacacacaaaggtagaaggccgtgggcgtaggatccgtatgcca 327
Query: 334 gctacgtgtgcggctaggatttttcaactgacgcgagagttaggtcacaagtctgacggc 393
|| || ||||||||||||||||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 328 gccacatgtgcggctaggattttccaacttacgcgagagttagggcacaaatcagacgga 387
Query: 394 gaaaccatccggtggcttctagagcacgcagagccagctattattgaagctactggaacg 453
||||| || |||||||||| ||||| ||||||||||| || ||||||||||| || ||
Sbjct: 388 gaaacgataaggtggcttcttgagcatgcagagccagccataattgaagctacaggcaca 447
Query: 454 ggaactgtccctgctattgcagtgtccattaatggaactctcaaaatcccaactacttcc 513
|| || ||||||||||| || || || ||||||||||| || ||||||||||| |||||
Sbjct: 448 ggtacagtccctgctatcgccgtttctattaatggaacccttaaaatcccaacaacttct 507
Query: 514 ccggcaaggcctgacggtgatgaattattgccgaagaagagacggaagagaccttcaaac 573
||||| || ||||| || ||||| ||||| | ||||||||| |||||||| |||||
Sbjct: 508 ccggctagacctgatggggatgagacgttgcccaggaagagacgtaagagaccctcaaat 567
Query: 574 agtgattttat 584
||||| |||||
Sbjct: 568 agtgaatttat 578
Score = 101 bits (51), Expect = 9e-21
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 760 tgggcaatccctgctgctgcgacaccgttttttaacgtggctgcaagacccatttctagt 819
|||||||| || ||| ||||||||||||||| || |||||||| ||||||||||||| |
Sbjct: 805 tgggcaataccagctaatgcgacaccgtttttcaatgtggctgctagacccatttctaat 864
Query: 820 tttgtctcggctatgcaacctggggtccagttggg 854
||||| || ||||||||||||||||||||| ||||
Sbjct: 865 tttgtttctgctatgcaacctggggtccagctggg 899
Score = 65.9 bits (33), Expect = 5e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 16 caccacactattgaagaaatcgatcgagaacaaagtatcacccccaatttctcctcctca 75
|||||||| || |||||||| || | |||||| || |||| |||||||||||| ||||||
Sbjct: 31 caccacaccatagaagaaattgaccaagaacagagcatcagccccaatttctcatcctca 90
Query: 76 gagacatctatggtagacccacctgaccc 104
|| || |||||||| || || ||||||||
Sbjct: 91 gaaacttctatggtggagcctcctgaccc 119
Score = 65.9 bits (33), Expect = 5e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 680 cgcaggggttggtgccgttttggcctatgggtacttttatgttgccaca 728
|||| |||||||||||||||||||||||||| || ||| ||||||||||
Sbjct: 698 cgcaagggttggtgccgttttggcctatggggacatttgtgttgccaca 746
Score = 60.0 bits (30), Expect = 3e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 976 ggtggcggtagtaatactaatactggcactgctcaaatgcttagggatttctctttggag 1035
||||| |||| || || ||||| ||| | ||| |||||| | ||||||||||| ||||||
Sbjct: 1027 ggtgggggtaatactagtaatagtggtagtgcccaaatgttaagggatttctcattggag 1086
Query: 1036 atttatgataaaaaggagcttcaatt 1061
|| |||||||| || |||||||||||
Sbjct: 1087 atatatgataagaaagagcttcaatt 1112
>29813.m001457 hypothetical protein
Length = 1263
Score = 89.7 bits (45), Expect = 3e-17
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 281 ccaaggaccgtcatacgaaggtggaaggccgtggccgtaggatccgtatgcctgctacgt 340
|||| |||||||| || || ||||||||||| ||||| |||||||||||||||| || |
Sbjct: 206 ccaaagaccgtcacactaaagtggaaggccgcggccgccggatccgtatgcctgcaacct 265
Query: 341 gtgcggctaggatttttcaactgacgcgagagttaggtcacaagtctgacggcgaaacca 400
|||| |||||| |||||||||| || || || | || |||||||||||||| |||||||
Sbjct: 266 gtgctgctagggtttttcaactcacacgtgaacttggccacaagtctgacggtgaaacca 325
Query: 401 t 401
|
Sbjct: 326 t 326