Jatropha Genome Database
- JcCB0005311.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0005311.20 - phase: 0 /partial
(783 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29815.m000491 ubiquitin-protein ligase, putative 733 0.0
>29815.m000491 ubiquitin-protein ligase, putative
Length = 3447
Score = 733 bits (370), Expect = 0.0
Identities = 529/582 (90%)
Strand = Plus / Plus
Query: 1 cattatgatggtgatttcaaggatctctctctggacttcacagttacagaagaatcattt 60
||||||||||||||| |||||||||||| |||||||||||| ||||||| |||||||||
Sbjct: 2845 cattatgatggtgatctcaaggatctcttcctggacttcacaattacagaggaatcattt 2904
Query: 61 ggtaaacggcatgtttttgagcttaaacctggtggcaaggatgtctgtgtgacaaatgag 120
|| |||||||||||| ||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 2905 gggaaacggcatgttattgagcttaaacctggtggcaagaatgtttctgtgacaaatgag 2964
Query: 121 aacaagatgcaatatgttcatgccatggcagattataaactcaatcgacagatattgcca 180
||||| ||||| ||| ||||||| ||||||||||||||||| || |||||||||||| |
Sbjct: 2965 aacaaaatgcagtatattcatgctatggcagattataaactaaaccgacagatattggcc 3024
Query: 181 ttttcaaatgcattttacaggggactgacagatgtcatatccccttcttggttaaagtta 240
|| |||||||||||||| |||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 3025 ttctcaaatgcattttataggggactaacagatatcatatccccatcttggttaaagtta 3084
Query: 241 tttaatgcaatggaattcaatcagttactttcaggtggtgactttgacattgatgtcgat 300
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 3085 tttaatgcaagtgaattcaatcagctactttcaggtggtgactttgacattgatgttgat 3144
Query: 301 gatttaagaaataacacacgttacacaggtggctactctgaggggagtaggacaatcaaa 360
||| ||||| |||||||||||||||||||||||||||||||||||||| | || ||||||
Sbjct: 3145 gatctaagagataacacacgttacacaggtggctactctgaggggagtcgaacgatcaaa 3204
Query: 361 cttttctgggaggtaattagaggatttcaaccaaatgaaagatgcttgctgcttaagttt 420
||||||||||||||||||| ||||||| ||||||||||| | || |||||||||| |||
Sbjct: 3205 cttttctgggaggtaattaaaggatttgaaccaaatgaacggtgtatgctgcttaaattt 3264
Query: 421 gtgaccagctgttctcgagctccgttactcgggttcaaacacttgcagccatcctttacc 480
|| ||||| |||||||||||||| ||||| ||||||||||||||||| || || ||||||
Sbjct: 3265 gtcaccagttgttctcgagctccattacttgggttcaaacacttgcaaccctcttttacc 3324
Query: 481 attcataaggttgcatgtgatgcctctctttgggcaacaatcggaggacaggatgtggat 540
|| |||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 3325 atccataaggttgcatgtgatgcctctctatgggcaacgattggaggacaggatgtggag 3384
Query: 541 cggcttccgtcagcttctacatgctacaacactctcaaggta 582
|||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 3385 cggcttccatcagcttctacatgctacaatactctcaaggta 3426