Jatropha Genome Database
- JcCB0005311.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0005311.10 + phase: 0
(1062 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29815.m000492 zinc finger protein, putative 1055 0.0
29991.m000624 zinc finger protein, putative 68 1e-10
>29815.m000492 zinc finger protein, putative
Length = 1059
Score = 1055 bits (532), Expect = 0.0
Identities = 898/1020 (88%)
Strand = Plus / Plus
Query: 43 cttcttgttttagtagcttcagtagttcatgcagagcctattgttcctgccctgataatc 102
||||||||| ||||| | ||||| | | |||| || ||||||||||| || || || |||
Sbjct: 40 cttcttgttctagtatcctcagtggctaatgctgatcctattgttccagcgctcatcatc 99
Query: 103 tttggcgactctgttgttgatgtgggtaataataataaccttaatacagttgttaaggca 162
||||| ||||| ||||||||||||||||| |||||||| || |||||| || ||||||||
Sbjct: 100 tttggggactccgttgttgatgtgggtaacaataataatctgaatacacttattaaggca 159
Query: 163 aattttcttccttatggaagagactttgttactcacagacctactggaagattctgcaat 222
|| || | |||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 160 aacttccctccttatggaagagacttcgttactcacaggccaactggaagattctgcaat 219
Query: 223 ggaaagctagctacagattttactgctgagtaccttggcttcacctcatacccaccagct 282
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 220 ggaaagctagctacagattttactgctgagtatcttgggttcacctcatacccaccagct 279
Query: 283 taccttagccaagatgccaaaggaagcaacattcttactggtgttaactttgcctctgct 342
|||||||||||||||||| |||| || ||||| || |||||||| ||||||||||| |||
Sbjct: 280 taccttagccaagatgcccaaggtagaaacatcctgactggtgtcaactttgcctcagct 339
Query: 343 gcttctggtttttatgatggcactgctaggctttatggggctattgcattgacccagcag 402
||||||||| | ||||||||||| || | || ||| | ||| | ||||||| | ||||
Sbjct: 340 gcttctggtctgtatgatggcacagccactctatatagtgctgtctcattgactcggcag 399
Query: 403 ttgaattactacagggaatataaaagaaaagttgtggatatggtaggacaaaccaaggcc 462
|||||||||||| ||| || ||| ||||||||| |||||||||||| ||||||||
Sbjct: 400 ctgaattactacaaggagtaccaaacaaaagttgtaatcatggtaggacaagccaaggcc 459
Query: 463 aatgacatattctccggtgctatccatcttctgagtgcagggagcagtgattttattcag 522
|||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 460 aatgacatattcgctggtgctatacatcttctgagtgcagggagcagtgattttattcag 519
Query: 523 aattactatatcaacccccttcttaatggaatctactcaccagatcggttctccgataat 582
|||||||| ||||| || ||| |||||||||||||| |||||||| | ||||| ||||||
Sbjct: 520 aattactacatcaatcctcttattaatggaatctacacaccagatagattctctgataat 579
Query: 583 ctcttgacatactacactgctttcattcagaatctatttgaaatgggagcaagaaggatt 642
||| | |||| |||| || |||||||||||||||||| || ||||||| |||||||||
Sbjct: 580 ctcatcacattctactcttctttcattcagaatctataccaactgggagctagaaggatt 639
Query: 643 ggagtgacaagcctaccaccaactgggtgtttacctgcagctattaccctctttggtgca 702
||||||||| ||||||||||||| |||||||| ||||||||||| || ||||||||||||
Sbjct: 640 ggagtgacaggcctaccaccaacggggtgtttgcctgcagctatcacgctctttggtgca 699
Query: 703 ggaagcaaccagtgtgttgataggttaaaccaagatgccatttccttcaacaataaatta 762
|||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||
Sbjct: 700 ggaagcaaccagtgtgttgagaggttaaacagagatgcaatttccttcaacaataaatta 759
Query: 763 aacagcacctcaaaaaacctggcgaataatctccctggtctcaaactcgtggtctttgat 822
|||||||| || ||| ||| | || ||||||||||| |||||||||||||| || |||
Sbjct: 760 aacagcacttctcaaagcctcgtgagcaatctccctggcctcaaactcgtggttttcgat 819
Query: 823 atctaccagcctctcttggatatgatctcgaaacccagtgacaatgggttctttgaagca 882
|||||||||||||||||||||||||| | |||||||| |||||| ||||||||||| ||
Sbjct: 820 atctaccagcctctcttggatatgatattgaaacccactgacaacgggttctttgaggcg 879
Query: 883 agaagggcttgctgtggaactggtacactagagacctcagtgctctgcaatgaaaggtct 942
|||||||||||||||||||| |||||| |||||||||||||| | ||||||| ||| |||
Sbjct: 880 agaagggcttgctgtggaacaggtacattagagacctcagtgttgtgcaatgcaagatct 939
Query: 943 gtgggaacatgcaccaatgctacgcaatacgtgttttgggatggatttcatccttctgaa 1002
|||| |||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 940 ctggggacatgctccgatgctacccaatatgtgttctgggatggatttcatccttctgaa 999
Query: 1003 gctgcgaataaggtcttggctggtgatttacttgcacagggatttgacctcatttcttga 1062
||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 1000 gctgctaataaggtcttggctggtgatctacttgcacagggatttgaccttatttcttga 1059
>29991.m000624 zinc finger protein, putative
Length = 1080
Score = 67.9 bits (34), Expect = 1e-10
Identities = 154/194 (79%)
Strand = Plus / Plus
Query: 103 tttggcgactctgttgttgatgtgggtaataataataaccttaatacagttgttaaggca 162
||||| |||||||||||||||| || ||||| ||| | ||| | || |||| || |||
Sbjct: 121 tttggagactctgttgttgatgcaggcaataacaatcatctttacaccattgtaaaagca 180
Query: 163 aattttcttccttatggaagagactttgttactcacagacctactggaagattctgcaat 222
|| || | ||||||||| |||||||||| | ||||| | | ||||| ||||||||||||
Sbjct: 181 aacttccctccttatggtagagactttgccaatcacaaatcaactggtagattctgcaat 240
Query: 223 ggaaagctagctacagattttactgctgagtaccttggcttcacctcatacccaccagct 282
||||| || || | || || |||||||| || | |||||||| || || ||||||||
Sbjct: 241 ggaaaacttgcatctgacttcactgctgaaaacataggcttcacttcttatccaccagcc 300
Query: 283 taccttagccaaga 296
||||||||| ||||
Sbjct: 301 taccttagcaaaga 314