Jatropha Genome Database

JcCB0004891.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0004891.30 + phase: 0 /partial
         (483 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006253 carbonic anhydrase, putative                            327   4e-89
29838.m001688 carbonic anhydrase, putative                            129   2e-29

>29908.m006253 carbonic anhydrase, putative
          Length = 879

 Score =  327 bits (165), Expect = 4e-89
 Identities = 241/266 (90%), Gaps = 4/266 (1%)
 Strand = Plus / Plus

                                                                       
Query: 220 gaagctgagcattttaaaaatcttgctgaattgcaatctccaaagtttatggtgattgct 279
           ||||| ||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 280 gaagcagagaatttcaaaaatcttgctgaattgcaatcaccgaagtttatggtgattgct 339

                                                                       
Query: 280 tgtgtagactctagggtttgtccatctaacattcttggatttcaacctggagaagctttt 339
           |||||||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||
Sbjct: 340 tgtgtagactctagagtttgcccatctaacgtccttggatttcaacctggagaagctttt 399

                                                                       
Query: 340 acggttagaaatgttgcaaatattgtgcctccacttgagaatggaccaacagaaacaaat 399
           | |||| |||||||||||||||| || ||  ||||||||||| ||||||||||||||| |
Sbjct: 400 atggttcgaaatgttgcaaatatagtccccgcacttgagaatagaccaacagaaacaact 459

                                                                       
Query: 400 gctgcacttgagtttgctgtaaatactcttgaa----aaaatatatttgtcattggccac 455
           ||||| |||||||||||||||||||||||||||    ||||||||||||| |||||||| 
Sbjct: 460 gctgcccttgagtttgctgtaaatactcttgaagttgaaaatatatttgttattggccat 519

                                     
Query: 456 agcaactgtgcaggaattcaagctct 481
           || |||||||||||||||||||||||
Sbjct: 520 agtaactgtgcaggaattcaagctct 545


>29838.m001688 carbonic anhydrase, putative
          Length = 942

 Score =  129 bits (65), Expect = 2e-29
 Identities = 140/165 (84%)
 Strand = Plus / Plus

                                                                       
Query: 259 ccaaagtttatggtgattgcttgtgtagactctagggtttgtccatctaacattcttgga 318
           ||||||||||||||||||||||||| |||||| |||||||| || ||||||||||| |||
Sbjct: 376 ccaaagtttatggtgattgcttgtgcagactccagggtttgcccctctaacattctggga 435

                                                                       
Query: 319 tttcaacctggagaagcttttacggttagaaatgttgcaaatattgtgcctccacttgag 378
           || ||||| |||||||| |||  |||  | ||||||||||| || |||||  ||   |||
Sbjct: 436 ttccaaccaggagaagcatttgtggtgcgcaatgttgcaaacatggtgccctcatacgag 495

                                                        
Query: 379 aatggaccaacagaaacaaatgctgcacttgagtttgctgtaaat 423
           | ||||||| ||||||||||||||||| | || ||||||||||||
Sbjct: 496 agtggaccatcagaaacaaatgctgcattagaatttgctgtaaat 540