Jatropha Genome Database

JcCB0004891.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0004891.10 + phase: 0 
         (648 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006256 conserved hypothetical protein                           90   2e-17

>29908.m006256 conserved hypothetical protein
          Length = 651

 Score = 89.7 bits (45), Expect = 2e-17
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                       
Query: 548 gatctcaagagctgagtgcaagaagaaccaaagtcatgcaaactctcggtctaattgctc 607
           |||||||||| ||||||||| | ||||||||||||||||||| ||| |||||||||||||
Sbjct: 551 gatctcaagaactgagtgcacggagaaccaaagtcatgcaaagtcttggtctaattgctc 610

                        
Query: 608 cttcaggatctcc 620
           |||| || |||||
Sbjct: 611 cttctgggtctcc 623



 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 109/135 (80%)
 Strand = Plus / Plus

                                                                       
Query: 189 tgttcgtgttaggctgattgggagctatgaatacatgtacgtggatcctattaaatgccg 248
           |||||||||||||||    ||||||||| |||||||||  ||||||||| ||||||| | 
Sbjct: 207 tgttcgtgttaggctctacgggagctataaatacatgtctgtggatccttttaaatggca 266

                                                                       
Query: 249 ctctgagtttcacattacacttgagaagaataatggttcatatgaagaaatatttaggaa 308
            | ||||||||| ||||  ||  || |||| ||||| |  ||| ||||||||||||||||
Sbjct: 267 ttttgagtttcagattattctcaagcagaacaatggctgttatcaagaaatatttaggaa 326

                          
Query: 309 agctctagagcagga 323
           | || | ||||||||
Sbjct: 327 atctttggagcagga 341