Jatropha Genome Database

JcCB0004761.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0004761.10 + phase: 0 
         (294 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30167.m000867 DNA binding protein, putative                           141   3e-33

>30167.m000867 DNA binding protein, putative
          Length = 246

 Score =  141 bits (71), Expect = 3e-33
 Identities = 152/179 (84%)
 Strand = Plus / Plus

                                                                       
Query: 53  acaaattgtttgaatacgctcttgcaatgtatgataaagatacgccggatcgatggcgaa 112
           |||||||||||||| | || |||||||| ||||||||||||||||| ||||| ||| |||
Sbjct: 41  acaaattgtttgaagatgcacttgcaatatatgataaagatacgcctgatcgttggagaa 100

                                                                       
Query: 113 atattgccaaaattgttggagacacaaacgaggaggaagtaaagagagaatatgatattc 172
            ||||||||| ||||||||||  ||||  |||||||||||||||| | | | ||| ||||
Sbjct: 101 ctattgccaagattgttggaggaacaactgaggaggaagtaaagaaacagtttgagattc 160

                                                                      
Query: 173 ttgtaaatgatatcaataatattgagttggacaaagttccaattccaaattacaagaat 231
           |||| |||||||||||| | |||||||  |||||| | ||| |||| ||||||||||||
Sbjct: 161 ttgtcaatgatatcaatcacattgagtcagacaaaatcccacttcctaattacaagaat 219