Jatropha Genome Database

JcCB0004391.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0004391.20 - phase: 0 /partial
         (330 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30162.m001264 ankyrin repeat domain protein, putative                 391   e-108

>30162.m001264 ankyrin repeat domain protein, putative
          Length = 1038

 Score =  391 bits (197), Expect = e-108
 Identities = 296/329 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtttgaaaaatgcactggcatctggtgctgacaaggacgaagaagattcagaaggaaga 60
            |||||||||  |||| | || ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 706  ggtttgaaagctgcattagcctctggtgctgacaaggatgaagaagattcagagggaaga 765

                                                                        
Query: 61   actgcgttgcattttgcttgtgggtatggagaggtgaagtgtgctcaaatccttgttgag 120
            || || ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||
Sbjct: 766  acagcattgcattttgcttgtggatatggagaggtgaagtgtgctcaagtccttcttgag 825

                                                                        
Query: 121  gcgggagcaactgttgatgcactggataaaaataagaacactgcgcttcattatgcagct 180
            || || || ||||||||||||||||||||||||||||| || || |||||||| ||||||
Sbjct: 826  gctggggctactgttgatgcactggataaaaataagaataccgcccttcattacgcagct 885

                                                                        
Query: 181  ggttatgggaggaaagagtgtgtggccctactgctagagaatggagctgctgttactctt 240
            |||||||| ||||| |||||||| ||||| || || |||||||| |||||||||||||||
Sbjct: 886  ggttatggaaggaaggagtgtgttgcccttcttctggagaatggtgctgctgttactctt 945

                                                                        
Query: 241  cagaacctggatggcaagacacccattgatgttgccaagctaaacaaccagcatgaagta 300
            |||||| ||||||||||||| ||||| || || ||||||||||||||||||||||| |||
Sbjct: 946  cagaacatggatggcaagactcccatcgacgtcgccaagctaaacaaccagcatgatgta 1005

                                         
Query: 301  ctgaagttgctcgagaaggatgccttcct 329
            || ||||||||||||||||||||||||||
Sbjct: 1006 ctaaagttgctcgagaaggatgccttcct 1034