Jatropha Genome Database
- JcCB0004021.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0004021.20 - phase: 0
(615 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29660.m000784 conserved hypothetical protein 400 e-111
30186.m001318 conserved hypothetical protein 369 e-101
33465.m000010 hypothetical protein 153 1e-36
>29660.m000784 conserved hypothetical protein
Length = 903
Score = 400 bits (202), Expect = e-111
Identities = 400/466 (85%)
Strand = Plus / Plus
Query: 11 ttcttaatctcaaggacagtaaagaagctgtttatggtgctcttgatgcctgggttgcat 70
||||| |||||||||| |||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 269 ttcttgatctcaaggatagtaaagaagctgtctatggtgcccttgatgcctgggtcgcat 328
Query: 71 gggagcgccagtttcctattgggtcaattaggagggctttgctcactcttgaaaaggaac 130
|||||| | | |||||||||| || ||| |||| ||| | ||||||||||| |
Sbjct: 329 gggagcacaattttcctattgcatcgcttaaaagggtcttgattttacttgaaaaggagc 388
Query: 131 agcagtggcacagagttgttcaggtaattaaatggatgctgagcaaggggcagggaaata 190
|||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 389 agcagtggcacaaagttgtccaggtaatcaaatggatgcttagcaaggggcaaggaaata 448
Query: 191 caatgggaacatatgggcagttaatacgcgctttagatatggatcatagagcagatgaag 250
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||| |||| |
Sbjct: 449 caatgggaacatatggacagttaatacgagctttagatatggaccatagagcaaatgagg 508
Query: 251 cacacttgttttggtcgaagaaaattggtacagatcttcactcggtgccttgggaattat 310
| ||| ||||||||| ||||||||| || ||||||||||| ||||| ||| | ||||
Sbjct: 509 ctcacatgttttggttgaagaaaatcggacttgatcttcactcagtgccatggcagttat 568
Query: 311 gcaaactcatgctatctatatactatagaaataacatgctagaatgcctcgtaaagcttt 370
|| | | ||| ||||| | ||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 569 gccatcgtatgatatctgtttactatagaaacaacatgctagagagccttgtaaagcttt 628
Query: 371 tcaagggcctggaagcttttgaccgcaaacctccagaaaaatcaattgtgcagaaagtgg 430
|||||||||||||||||||||| || |||||||| || |||||||| ||||||||||||
Sbjct: 629 tcaagggcctggaagcttttgatcgtaaacctcctgacaaatcaatcttgcagaaagtgg 688
Query: 431 caaatgcatatgagatgctaggtatgcttgaggaaaaagatcgtgt 476
|| |||||||||||||| ||||||||||||| || ||||| |||||
Sbjct: 689 cagatgcatatgagatgttaggtatgcttgaagagaaagaacgtgt 734
>30186.m001318 conserved hypothetical protein
Length = 954
Score = 369 bits (186), Expect = e-101
Identities = 396/466 (84%)
Strand = Plus / Plus
Query: 11 ttcttaatctcaaggacagtaaagaagctgtttatggtgctcttgatgcctgggttgcat 70
||||| |||||||||| |||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 173 ttcttgatctcaaggatagtaaagaagctgtctatggtgccgttgatgcctgggtcgcat 232
Query: 71 gggagcgccagtttcctattgggtcaattaggagggctttgctcactcttgaaaaggaac 130
|||||| | | |||||||||| || ||| |||| ||| | ||||||||||| |
Sbjct: 233 gggagcacaattttcctattgcatcgcttaaaagggtcttgattttacttgaaaaggagc 292
Query: 131 agcagtggcacagagttgttcaggtaattaaatggatgctgagcaaggggcagggaaata 190
||||||||||||||||||| |||||||| |||||||| | ||||| ||||| |||||||
Sbjct: 293 agcagtggcacagagttgtccaggtaatcaaatggataattagcaaagggcaaggaaata 352
Query: 191 caatgggaacatatgggcagttaatacgcgctttagatatggatcatagagcagatgaag 250
|||||||||||||||| ||||||||| | ||| |||||||||| ||||||||| |||| |
Sbjct: 353 caatgggaacatatggacagttaataagagctctagatatggaccatagagcaaatgagg 412
Query: 251 cacacttgttttggtcgaagaaaattggtacagatcttcactcggtgccttgggaattat 310
| ||| ||||||||| |||||||||||| ||||||||||| ||||| ||| | ||||
Sbjct: 413 ctcacatgttttggttgaagaaaattggacttgatcttcactcagtgccatggcagttat 472
Query: 311 gcaaactcatgctatctatatactatagaaataacatgctagaatgcctcgtaaagcttt 370
|| | | ||| ||||| ||||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 473 gccatcgtatgatatctgtatactatagaaacaacatgctagagagccttgtaaagcttt 532
Query: 371 tcaagggcctggaagcttttgaccgcaaacctccagaaaaatcaattgtgcagaaagtgg 430
||||||||||||||||||||| | |||||||| || |||||||| |||||||||||||
Sbjct: 533 ccaagggcctggaagcttttgatcataaacctcctgacaaatcaatcgtgcagaaagtgg 592
Query: 431 caaatgcatatgagatgctaggtatgcttgaggaaaaagatcgtgt 476
|| |||||||||||||| ||||||||||||| || ||||| |||||
Sbjct: 593 cagatgcatatgagatgttaggtatgcttgaagagaaagaacgtgt 638
>33465.m000010 hypothetical protein
Length = 217
Score = 153 bits (77), Expect = 1e-36
Identities = 179/213 (84%)
Strand = Plus / Plus
Query: 154 gtaattaaatggatgctgagcaaggggcagggaaatacaatgggaacatatgggcagtta 213
||||| |||||||| | ||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 1 gtaatcaaatggataattagcaaagggcaaggaaatacaatgggaacatatggacagtta 60
Query: 214 atacgcgctttagatatggatcatagagcagatgaagcacacttgttttggtcgaagaaa 273
||| | ||| |||||||||| ||||||||| |||| || ||| ||||||||| |||||||
Sbjct: 61 ataagagctctagatatggaccatagagcaaatgaggctcacatgttttggttgaagaaa 120
Query: 274 attggtacagatcttcactcggtgccttgggaattatgcaaactcatgctatctatatac 333
||||| ||||||||||| ||||| ||| | |||||| | | ||| ||||| |||||
Sbjct: 121 attggacttgatcttcactcagtgccatggcagttatgccatcgtatgatatctgtatac 180
Query: 334 tatagaaataacatgctagaatgcctcgtaaag 366
|||||||| ||||||||||| |||| ||||||
Sbjct: 181 tatagaaacaacatgctagagagccttgtaaag 213