Jatropha Genome Database

JcCB0004021.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0004021.10 + phase: 0 
         (1170 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28161.m000228 TRANSPARENT TESTA 1 protein, putative                   220   1e-56

>28161.m000228 TRANSPARENT TESTA 1 protein, putative
          Length = 1098

 Score =  220 bits (111), Expect = 1e-56
 Identities = 369/455 (81%)
 Strand = Plus / Plus

                                                                       
Query: 487 catgttcatttctgtgaaatatgcggcaaaggattcaagcgggacgctaatttgcggatg 546
           |||||||||||||| || || ||||| || || |||||||| |||||||||||  |||||
Sbjct: 394 catgttcatttctgcgagatttgcgggaagggtttcaagcgagacgctaatttaaggatg 453

                                                                       
Query: 547 cacatgagggcccatggaaatcagttcaaaactccagaggcgctcgcgaagcctgataaa 606
           || ||| | |||||||| || ||||| |||||||| |||||  |  | | ||||||||||
Sbjct: 454 catatgcgtgcccatgggaaccagtttaaaactccggaggctttatcaaggcctgataaa 513

                                                                       
Query: 607 ggaaacgaattttcagcggaggtaaagaaaactagattctcttgtccttttttgggatgt 666
           || ||||| |||| ||||  ||  | |||||  |||||||| ||||| |     ||||||
Sbjct: 514 gggaacgagtttttagcgacggggaggaaaaggagattctcgtgtccgtacgaaggatgt 573

                                                                       
Query: 667 aaccgaaacaagaagcataaaaagtttaggccactaaaatcggtgatttgtgttcgaaat 726
           ||  | ||||||||||| |||||||| |||||  |||| || ||| |||||||  | |||
Sbjct: 574 aataggaacaagaagcacaaaaagttcaggcctttaaagtctgtggtttgtgtaaggaat 633

                                                                       
Query: 727 catttcaaaagaagtcattgtccaaagatgttctcctgtaaccgttgcaataagaagagt 786
           ||||| || || ||||||||||| |||||||  || ||||| ||||| || |||| ||||
Sbjct: 634 cattttaagaggagtcattgtccgaagatgtattcttgtaatcgttgtaaaaagaggagt 693

                                                                       
Query: 787 ttctctgttgtggcggatttgaagagtcatttgaagcattgtggagagtccaaatggaaa 846
           |||||||| || || ||||||| |||||| |||||||||||||| ||||||| |||||  
Sbjct: 694 ttctctgtggttgctgatttgaggagtcacttgaagcattgtggcgagtccagatggagg 753

                                                                       
Query: 847 tgctcatgtgggactactttttctagaaaggataagttgtttgggcacatagcattgttt 906
           ||||| ||||||||||||||||| || || |||||| | ||||| || ||  | ||||||
Sbjct: 754 tgctcttgtgggactactttttcgaggaaagataagctctttggtcatatgactttgttt 813

                                              
Query: 907 gaaggccacgtgcctgctgttattggggaagatga 941
           ||||| ||| ||||||||||| |||||||||||||
Sbjct: 814 gaaggacacatgcctgctgttgttggggaagatga 848