Jatropha Genome Database
- JcCB0003421.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0003421.10 - phase: 2 /partial
(802 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29999.m000208 DNA binding protein, putative 906 0.0
>29999.m000208 DNA binding protein, putative
Length = 2571
Score = 906 bits (457), Expect = 0.0
Identities = 703/785 (89%)
Strand = Plus / Plus
Query: 2 gctcatgattttagcactgatatcttcgatgatcgaacagttatcctttgtgaccaatgc 61
||||||||||||||||| ||| |||| |||| |||||||| ||||||||||| |||||
Sbjct: 1768 gctcatgattttagcacccataccttcaatgaccgaacagtcatcctttgtgatcaatgt 1827
Query: 62 gagagagaattccatgttgggtgcttgcgtgacagcggacgttgtgatctaaaagagatc 121
||||| || ||||||||||| ||||||||||||| |||| ||||||||||||||||||
Sbjct: 1828 gagagggagttccatgttggttgcttgcgtgacaatggactgtgtgatctaaaagagatc 1887
Query: 122 cctaaggataattggttctgttctaatgactgccatagaatctttgcggctctacaggat 181
|| |||||||| ||||||||||||||||||||| |||| |||| || |||| ||||| ||
Sbjct: 1888 cccaaggataactggttctgttctaatgactgcaataggatctatgaggctttacagaat 1947
Query: 182 tttgtttctagtggaatacagatgattccttctttgcagttggatatcataactagaaag 241
|||||||| |||||| ||||||||||||||||||||||| || ||||||| ||| |||||
Sbjct: 1948 tttgtttccagtggagtacagatgattccttctttgcagctgaatatcatcactggaaag 2007
Query: 242 catgctgagaaaggattattaatggatggactatcaaatgatgtccaatggcgaattctg 301
||||||||||||||||||| || ||||||| | ||||||| | ||||||||||||||
Sbjct: 2008 catgctgagaaaggattatatattgatggacaagcaaatgactttcaatggcgaattcta 2067
Query: 302 atgggaaaaagtcgccgcaaagaagatctttcattgttgtcagctactgctgcaattttt 361
||||||||||||||| | ||||||||||||| |||||||| || ||||||||||||||
Sbjct: 2068 atgggaaaaagtcgctaccaagaagatctttctttgttgtctgcagctgctgcaattttt 2127
Query: 362 cgagagtgttttgatcccattgttgcaaaaactggtcgtgatttgattcctgttatggtc 421
|||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||
Sbjct: 2128 cgagagtgttttgatcccattgttgcaaaatctgggcgtgatctgattcctgttatggtc 2187
Query: 422 tatgggagaaatatttctggccaagaatttgggggaatgtactgtgtgctattacttgtg 481
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 2188 tatgggagaaatatttctgggcaagaatttggtggaatgtactgtgtgctattacttgta 2247
Query: 482 aagaatgtcgttgtatcagctggtcttcttaggatttttggtagggaggctgctgagctt 541
|||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 2248 aagaatgttgttgtatcagctggtcttcttaggatttttggtagggatgttgctgagctc 2307
Query: 542 cctctagttgcaacgagtagagaacatcaaggaaaaggttacttccaagcattattctca 601
|||||||| || || ||| |||||||||||||||||||||||||||||||| | ||||||
Sbjct: 2308 cctctagtggctacaagtcgagaacatcaaggaaaaggttacttccaagcactgttctca 2367
Query: 602 tgcattgagagattactttgctccctcaatgtggtaaacttggtgctaccagcagctgag 661
||||||||||| ||||| ||||| || ||||||||||| |||||||||| |||||||||
Sbjct: 2368 tgcattgagaggttactgtgctctctgaatgtggtaaagctggtgctaccggcagctgag 2427
Query: 662 gaagctgagtcaatttggacaaggagatttggcttcagaaagatgagcgagggacaactg 721
||||| |||||||| |||||||| ||||||||||||||||| |||| ||||| |||||||
Sbjct: 2428 gaagccgagtcaatctggacaagaagatttggcttcagaaaaatgaccgaggaacaactg 2487
Query: 722 tcaaaatatacaagggaactgcaggtgacgatattcaagggcacaacaatgctggagaaa 781
||| | ||||||||||| |||||| | || ||||||||||||||| |||||||||||||
Sbjct: 2488 tcacagtatacaagggagctgcagttaaccatattcaagggcacatcaatgctggagaag 2547
Query: 782 gaggt 786
|||||
Sbjct: 2548 gaggt 2552