Jatropha Genome Database
- JcCB0003261.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0003261.20 - phase: 0
(1326 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29656.m000470 3-dehydroquinate synthase, putative 793 0.0
52313.m000014 3-dehydroquinate synthase, putative 339 3e-92
>29656.m000470 3-dehydroquinate synthase, putative
Length = 1017
Score = 793 bits (400), Expect = 0.0
Identities = 706/808 (87%)
Strand = Plus / Plus
Query: 181 tctgcgcaggttatggaccagtcggttggtgaagcaagttctaaagcgcctaccattgtg 240
||||| ||||||||||| || || |||| || |||||||||||||| ||||| |||||
Sbjct: 190 tctgctcaggttatggatcaatcagttgctgctgcaagttctaaagctcctactattgtt 249
Query: 241 gaagtcgatttgggtaaccggagctacccgatttacattggatcaggacttcttgatcaa 300
|||||||| |||||||| ||||| ||||| || || |||||||| ||||||||| |||||
Sbjct: 250 gaagtcgacttgggtaatcggagttaccccatctatattggatccggacttcttcatcaa 309
Query: 301 cctgaattgctccaaaggcatgttcatggaaagagagtgcttgtggtgacaaacaacaca 360
|| |||||||| ||||| ||||| |||||||||||||||||||||||||| || | ||||
Sbjct: 310 cccgaattgcttcaaagacatgtacatggaaagagagtgcttgtggtgactaatagcaca 369
Query: 361 gtagcaccaatatacctggatagagtggttgatgcattaacaagagggaacccaaatgtt 420
||||| ||| | || || |||| ||||||||||||||| || |||| || |||||||||
Sbjct: 370 gtagcgccattgtatcttgataaagtggttgatgcattgactagagacaatccaaatgtt 429
Query: 421 tcagttgagagtgtaattttgcctgatggggagaagtataagaatatggaaactcttatg 480
|| ||||||||||| |||||||||||||| || ||| | ||||| |||||| |||||||
Sbjct: 430 tctgttgagagtgtgattttgcctgatggtgaaaagcacaagaacatggaagttcttatg 489
Query: 481 aaagtatttgacaaggccattgaatcaagattggatagacggtgtacatttgttgctctt 540
||| ||||||| || || || |||||||||||||||| |||||| ||||||||||||
Sbjct: 490 aaaatatttgataaagctatccaatcaagattggataggaagtgtacgtttgttgctctt 549
Query: 541 ggagggggtgttattggtgacatgtgtggatatgccgctgcctcttttctccgcggtgtt 600
||||| |||||||| || ||||||||||||||||| ||||| |||||||| || ||||||
Sbjct: 550 ggaggtggtgttataggcgacatgtgtggatatgcagctgcttcttttcttcgtggtgtt 609
Query: 601 aatttcattcagattcccaccactgttatggcacaggttgattcttctgttggaggaaaa 660
||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||
Sbjct: 610 aatttcattcagattcctacaactgttatggcacaggtggattcttctgttggagggaaa 669
Query: 661 actggtattaatcaccgccttggaaagaacctcattggagcattttaccagcctcaatgt 720
||||| || ||||||| |||||| |||||| | ||||||||||||||||||||||| |||
Sbjct: 670 actgggataaatcacccccttgggaagaacttgattggagcattttaccagcctcagtgt 729
Query: 721 gtgctcattgacactgacactttaaacactctgcccaatagggaactggcatctggcctt 780
|| ||||| ||||||||||| ||||||| ||||| |||| ||||||||||| || ||
Sbjct: 730 gtactcatagacactgacacactaaacacactgcctgatagagaactggcatcaggtttt 789
Query: 781 gcagaggttgtaaagtatgggcttataagagatgctgaattttttgagtggcaggagaag 840
|| |||||| | ||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 790 gcggaggttatcaagtatgggctcattagagatgctgaattttttgagtggcaggagaag 849
Query: 841 aatatgccaaaattaatggcaagggatccagatgcactggcatatgccataaagcgttca 900
|||||||||||| ||||||||||||||||| | ||| || ||||||||||||||||||
Sbjct: 850 aatatgccaaaactaatggcaagggatccaagcgtactagcttatgccataaagcgttca 909
Query: 901 tgtgaaaataaggctgaggtcgtatccttggatgagaaggaaagtggactaagggcaaca 960
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 910 tgtgaaaataaggctgaggttgtatccttggatgagaaggaaagtggactcagggcaaca 969
Query: 961 ctgaacttgggtcatacatttggccatg 988
||||| | ||||| |||||||||||||
Sbjct: 970 ttgaacctaggtcacacatttggccatg 997
>52313.m000014 3-dehydroquinate synthase, putative
Length = 339
Score = 339 bits (171), Expect = 3e-92
Identities = 282/319 (88%)
Strand = Plus / Plus
Query: 1004 ttggatatgggcagtggcttcacggagaagctgttgcagccggcatggtgatggctgttg 1063
||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct: 17 ttggatatgggcaatggctccatggagaagctgttgcagccggcatggtaatggctgttg 76
Query: 1064 acatgtcataccgccttggttggattgatgattcaattgtaaagcgagttcataacattc 1123
| |||||||||||||||||||||||||||||||| | || |||||||| |||| |||||
Sbjct: 77 agatgtcataccgccttggttggattgatgattctctcgtgaagcgagtccatagcattc 136
Query: 1124 ttcaacaggctaagttacccaccgcgccaccagacaccatgactgtagaaatgtttaaat 1183
| ||||||| |||||||||||| | |||||||| ||||||||||| |||||||| || |
Sbjct: 137 tagaacaggcaaagttacccacctccccaccagagaccatgactgtggaaatgttcaagt 196
Query: 1184 ccgtcatggcggttgataagaaggtagctgatgggctgctaagacttatcctgcttaagg 1243
| ||||||||||||||||| ||||||||||| || |||||||| |||||| | || || |
Sbjct: 197 ctgtcatggcggttgataaaaaggtagctgacggactgctaaggcttatcttactgaaag 256
Query: 1244 gtcctctgggtaattgtgtatttacgggtgattatgataggaaggctctcgatgatacac 1303
|||||||||||||||||||||| || |||||||||||||| ||||| ||||| ||||| |
Sbjct: 257 gtcctctgggtaattgtgtattcactggtgattatgatagaaaggccctcgacgatacgc 316
Query: 1304 tccgggcattttgcaagtc 1322
||| ||||||||||||||
Sbjct: 317 tccatgcattttgcaagtc 335