Jatropha Genome Database

JcCB0003261.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0003261.10 - phase: 0 
         (648 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29656.m000469 21 kDa protein precursor, putative                       98   8e-20
30147.m014202 21 kDa protein precursor, putative                       52   4e-06

>29656.m000469 21 kDa protein precursor, putative
          Length = 618

 Score = 97.6 bits (49), Expect = 8e-20
 Identities = 109/129 (84%)
 Strand = Plus / Plus

                                                                       
Query: 157 tacctaaaaacagcctgcaaatccaccacatatccaaaactgtgctatagctctctttct 216
           ||||||||||| |||||||  || |||||||| |||||||| ||||||||||| ||||||
Sbjct: 133 tacctaaaaactgcctgcagttctaccacatacccaaaactctgctatagctccctttct 192

                                                                       
Query: 217 tcctattcatccataataaaaaccgatgacctaatcctttgtaccacagcattaaatgta 276
            ||||||  | ||  || ||||||||||| |||| |||||||| ||| |||||||| |||
Sbjct: 193 ccctattgctacactatcaaaaccgatgatctaaccctttgtagcactgcattaaacgta 252

                    
Query: 277 tccctacaa 285
           ||| |||||
Sbjct: 253 tccttacaa 261



 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 455 tgagattccaaatttctaatataaaaacttgggttagtgctgc 497
           |||||||||| |||||||| ||| |||||||||||||||||||
Sbjct: 431 tgagattccagatttctaacatacaaacttgggttagtgctgc 473


>30147.m014202 21 kDa protein precursor, putative
          Length = 621

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 131 aaacctctaacaaaacctatagaaactacctaaaaacagcctgcaaatccaccacata 188
           ||||||| || | |||||| | ||| |||||||||||||| ||||| |||||||||||
Sbjct: 113 aaacctcaaagacaacctacaaaaattacctaaaaacagcttgcaactccaccacata 170