Jatropha Genome Database
- JcCB0003071.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0003071.20 + phase: 0
(1299 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29792.m000622 afc, putative 1572 0.0
30147.m013850 afc, putative 402 e-111
28637.m000208 afc, putative 133 3e-30
29794.m003468 afc, putative 107 2e-22
>29792.m000622 afc, putative
Length = 1299
Score = 1572 bits (793), Expect = 0.0
Identities = 1170/1298 (90%)
Strand = Plus / Plus
Query: 1 atggagatggactacgtcactcagttccctcataatcatatggatcgtcgtccaagaaaa 60
||||||||||| || |||| ||| | |||||| ||||| |||||||||||||| ||||||
Sbjct: 1 atggagatggattatgtcagtcaataccctcacaatcacatggatcgtcgtcccagaaaa 60
Query: 61 aggcccaggtttgcttgggatatccctcaagctcacacaaaggctcaatcaggattgtat 120
|| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||| || |||
Sbjct: 61 agacccagatttgcttgggatattcctcaagctcatacaaaggctcagtcagggttatat 120
Query: 121 tatggccacgaggttggaaatggaacaagcattggaacatcaagagtacttccagacaat 180
||||| || ||||||||||||||||||||||||||| ||||||| ||||| |||||| ||
Sbjct: 121 tatgggcaagaggttggaaatggaacaagcattggaccatcaagggtactcccagaccat 180
Query: 181 gccagtctatttgtaaagggattgactcaaaaaggctnnnnnnnatggcgagatgatgac 240
|||||||||||||||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 181 gccagtctatttgtaaagggattggctcaaaaaggctctcccccatggcgagacgatgac 240
Query: 241 aaagatggacattacatgtttgctctcggggagaatttaacctctcgctacaagatccag 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 241 aaagatggacattacatgtttgctctcggggagaatttaacctctcgctataagatccag 300
Query: 301 agaaaaattggtgaaggaactttcggtcaggttttggaatgctgggatagggaagcaagg 360
|| ||| |||||||||| || ||| ||||||| |||||||| |||||||||||| ||
Sbjct: 301 aggaaacttggtgaaggcacattctgtcaggtcttggaatgttgggatagggaaaataga 360
Query: 361 gaggtggttgccataaaggttgttcgaagcacaaagaaataccgcgaagcagcaatgttg 420
||| ||||||||||||| ||||| ||||| |||||||| || || |||||||||||||||
Sbjct: 361 gagatggttgccataaaagttgtgcgaagtacaaagaagtatcgtgaagcagcaatgttg 420
Query: 421 gaaattgacatgctccacttgcttggaaagtatgacagaaatggcagtcgttgtgtccaa 480
||||| | ||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 421 gaaatcaatgtgctccacttgcttggaaagtatgatagaaatggcagtcgttgtgttcaa 480
Query: 481 atacgaaactggtttgattatcgtaaccatatctgtattgtatttgagatgcttggacca 540
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 atacgaaactggtttgattaccgtaaccatatatgtattgtatttgagatgcttggacca 540
Query: 541 agcttgtatgattttcttcggaaaaataattatcgcccatttccggttgatcttgtccgt 600
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agcttgtatgattttcttcgaaaaaataattatcgcccatttccggttgatcttgtccgc 600
Query: 601 gagcttggcagacaactcttggaatgtgtagcattcatgcatgatttgcgcctaatccat 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||
Sbjct: 601 gagcttggcagacaactcctggaatgtgtagcattcatgcatgatttgcgcctcattcat 660
Query: 661 acagacttgaaaccagagaacatacttttcgtgtctccggaatatgtaaaaataccagac 720
|| |||||||| || |||||||| ||||| |||||||| |||||| | ||||||||||||
Sbjct: 661 actgacttgaagccggagaacatcctttttgtgtctcctgaatatattaaaataccagac 720
Query: 721 tacaaggttccatcaatctcacccaccgagggaacctattttaagaggttaccaaagtct 780
|||||||| ||||||||||| || | |||| ||||||| |||||||| ||||||||
Sbjct: 721 tacaaggtcccatcaatctctcctgctgaggcgacctattacaagaggttgccaaagtca 780
Query: 781 agtgctattaaggttattgattttggtagcacagcttatgggcaccatgaacacaactat 840
|||||||||||||||||||||||||| || |||| |||||||| ||||| ||||| |||
Sbjct: 781 agtgctattaaggttattgattttggcagtgcagcctatgggcatcatgagcacaattat 840
Query: 841 attgtctcaaccaggcactaccgtgcacctgaggttattctagggtttggatggagttat 900
|||||||| ||| |||| |||||||| |||||||||||||||||| |||||||||| ||
Sbjct: 841 attgtctccacccggcattaccgtgcgcctgaggttattctagggcttggatggagctac 900
Query: 901 ccatgtgacatatggagtgttggttgtatcttggtggaactttgctcgggagaagcatta 960
|||||||| || ||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 901 ccatgtgatatgtggagtgttggctgtatcttggttgaactttgctcaggagaagcattg 960
Query: 961 tttcagacgcatgagaatttagagcatttggccatgatggagagggttttaggaccattg 1020
|||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 961 tttcagactcatgagaacttagagcacttggccatgatggagagggttttgggaccattg 1020
Query: 1021 cctcagaacatgttgaaaagagcagatcgacatgcagagaagtatgtgagaaggggtagg 1080
|||||| ||||||||| |||||||||||||||||| ||||||||||| |||| |||||||
Sbjct: 1021 cctcagcacatgttgagaagagcagatcgacatgcggagaagtatgttagaaagggtagg 1080
Query: 1081 ttggactggccagatggtgcaacctctcgggaaagcatcaaagctgttatgaagctacct 1140
||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1081 ttggactggccggatgctgcaacctcgcgggaaagcatcaaagctgtcatgaagctacca 1140
Query: 1141 cgtcttcagaatctcgtaatgcagcacgttgatcactccgctggtgatatcattgatctc 1200
|||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 1141 cgtcttcagaatatagtaatgctgcatgttgatcactccgctggtgatatcattgatctc 1200
Query: 1201 ttgcaaggtcttcttagatatgatccctccagcagactgacagctcatgaagcccttagg 1260
||||||||||| ||||||||||| ||||||| |||| | || |||||||| |||||||||
Sbjct: 1201 ttgcaaggtctccttagatatgacccctccaacagattaacggctcatgaggcccttagg 1260
Query: 1261 caccccttctttacaagggatcattacaggagatttta 1298
|| || ||||||||||||||||||||||||||||||||
Sbjct: 1261 catcctttctttacaagggatcattacaggagatttta 1298
>30147.m013850 afc, putative
Length = 1308
Score = 402 bits (203), Expect = e-111
Identities = 622/759 (81%), Gaps = 2/759 (0%)
Strand = Plus / Plus
Query: 469 cgttgtgtccaaatacgaaactggtttgattatcgtaaccatatctgtattgtatttgag 528
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 481 cgttgtgtgcaaatacggaactggtttgactatcgtaaccatatctgtattgtttttgag 540
Query: 529 atgcttggaccaagcttgtatgattttcttcggaaaaataattatcgcccatttccggtt 588
| ||||||||||||||| || ||||||||||| ||||| ||||||||| ||||||| ||
Sbjct: 541 aagcttggaccaagcttatacgattttcttcgcaaaaacaattatcgctcatttcccatt 600
Query: 589 gatcttgtccgtgagcttggcagacaactcttggaatgtgtagcattcatgcatgatttg 648
||||||||||||||| |||| |||||||| ||||||||| ||||||| |||||||| |||
Sbjct: 601 gatcttgtccgtgagattggaagacaactgttggaatgtatagcatttatgcatgacttg 660
Query: 649 cgcctaatccatacagacttgaaaccagagaacatacttttcgtgtctccggaatatgta 708
| ||| || ||||| || ||||| || ||||| || ||| | || ||||| || |||||
Sbjct: 661 cacctgattcatactgatttgaagcctgagaatattcttctagtctctcctgattatgtc 720
Query: 709 aaaataccagactacaagg-ttccatcaatctcacccaccgagggaacctattttaagag 767
|| | ||||| ||||||| ||||| | ||||| | || | |||| || || ||
Sbjct: 721 aaggttccagattacaagggttccacccga-tcaccaaaggacagttcctacttcaaaag 779
Query: 768 gttaccaaagtctagtgctattaaggttattgattttggtagcacagcttatgggcacca 827
| || |||||||||||| | ||||| |||||||||||||||||| |||||| || |||
Sbjct: 780 agtccccaagtctagtgctgtgaaggtgattgattttggtagcacaacttatgagcgcca 839
Query: 828 tgaacacaactatattgtctcaaccaggcactaccgtgcacctgaggttattctagggtt 887
|| || ||||||||||| ||||| |||| ||||||||||| || |||||||| || |
Sbjct: 840 agatcagaactatattgtatcaacacggcattaccgtgcaccagaagttattctcggact 899
Query: 888 tggatggagttatccatgtgacatatggagtgttggttgtatcttggtggaactttgctc 947
|||||||||||||| ||||| |||||||| || || || |||||||||||| | ||| |
Sbjct: 900 aggatggagttatccttgtgatatatggagcgtcggatgcatcttggtggaattatgcac 959
Query: 948 gggagaagcattatttcagacgcatgagaatttagagcatttggccatgatggagagggt 1007
|| || ||||| ||||| || ||||||||||| ||||| | || |||||||| ||||
Sbjct: 960 tggtgaggcattgtttcaaacacatgagaatttggagcacctagcaatgatggaacgggt 1019
Query: 1008 tttaggaccattgcctcagaacatgttgaaaagagcagatcgacatgcagagaagtatgt 1067
| || || ||||||||| | |||||||| || |||||||||||| || || |||||
Sbjct: 1020 gcttgggcccttgcctcagcatatgttgaagaggatagatcgacatgctgaaaaatatgt 1079
Query: 1068 gagaaggggtaggttggactggccagatggtgcaacctctcgggaaagcatcaaagctgt 1127
||||||||||| |||||||||| || ||||| || || ||||||| || ||||||||
Sbjct: 1080 tagaaggggtagactggactggcctgaaggtgcgacttcgagggaaagtattaaagctgt 1139
Query: 1128 tatgaagctacctcgtcttcagaatctcgtaatgcagcacgttgatcactccgctggtga 1187
| ||||||||||||||||||||||||| ||||||||||| || ||||| || ||||| ||
Sbjct: 1140 tttgaagctacctcgtcttcagaatctagtaatgcagcatgtagatcattcagctggaga 1199
Query: 1188 tatcattgatctcttgcaaggtcttcttagatatgatcc 1226
| |||| |||| |||||||| || || |||||||||||
Sbjct: 1200 tctcatacatcttttgcaaggactgctgagatatgatcc 1238
Score = 109 bits (55), Expect = 4e-23
Identities = 106/123 (86%)
Strand = Plus / Plus
Query: 225 atggcgagatgatgacaaagatggacattacatgtttgctctcggggagaatttaacctc 284
|||||| || |||||||| ||||| |||||||||||||| || || || |||||||| ||
Sbjct: 237 atggcgggaagatgacaaggatggccattacatgtttgcgcttggagaaaatttaacttc 296
Query: 285 tcgctacaagatccagagaaaaattggtgaaggaactttcggtcaggttttggaatgctg 344
|||||| ||||| || || ||||| |||||||| || || ||||||||||||||||||||
Sbjct: 297 tcgctataagatacacagcaaaatgggtgaaggtacctttggtcaggttttggaatgctg 356
Query: 345 gga 347
|||
Sbjct: 357 gga 359
>28637.m000208 afc, putative
Length = 1176
Score = 133 bits (67), Expect = 3e-30
Identities = 154/183 (84%)
Strand = Plus / Plus
Query: 462 tggcagtcgttgtgtccaaatacgaaactggtttgattatcgtaaccatatctgtattgt 521
||||| ||||||||| |||||||| || |||||||| |||||||| ||||| ||||||||
Sbjct: 519 tggcactcgttgtgtgcaaatacggaattggtttgactatcgtaatcatatttgtattgt 578
Query: 522 atttgagatgcttggaccaagcttgtatgattttcttcggaaaaataattatcgcccatt 581
|||||||| ||||||||||||||| || |||||||| || ||||| | || | ||||
Sbjct: 579 atttgagaagcttggaccaagcttatacgattttctccgcaaaaacagctacagttcatt 638
Query: 582 tccggttgatcttgtccgtgagcttggcagacaactcttggaatgtgtagcattcatgca 641
||| ||||||| || || ||||||||||||||||| ||||| | ||| ||||| |||||
Sbjct: 639 tcccattgatctagttcgggagcttggcagacaacttttggagtctgttgcatttatgca 698
Query: 642 tga 644
|||
Sbjct: 699 tga 701
Score = 73.8 bits (37), Expect = 2e-12
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 865 gcacctgaggttattctagggtttggatggagttatccatgtgacatatggagtgttggt 924
||||| |||||||| |||| ||||||||| ||||| ||||| ||||||||||||||
Sbjct: 922 gcaccagaggttatcttaggtcttggatggaactatccttgtgatttatggagtgttggt 981
Query: 925 tgtatcttggtggaactttgctcgggagaagcattatttcagacgcatgagaatttagag 984
|| || | || ||| | || || || ||||| |||||||| || |||||||| || |||
Sbjct: 982 tgcatacttgttgaattatgttctggtgaagccttatttcaaacacatgagaacttggag 1041
Query: 985 catttggccatgatggagagggttttagg 1013
||| | |||||||||||||| ||||||||
Sbjct: 1042 catcttgccatgatggagagagttttagg 1070
>29794.m003468 afc, putative
Length = 1212
Score = 107 bits (54), Expect = 2e-22
Identities = 126/150 (84%)
Strand = Plus / Plus
Query: 868 cctgaggttattctagggtttggatggagttatccatgtgacatatggagtgttggttgt 927
||||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||||
Sbjct: 790 cctgaggttattctaggtcttggttggagttatccatgcgacttatggagtgttggttgt 849
Query: 928 atcttggtggaactttgctcgggagaagcattatttcagacgcatgagaatttagagcat 987
|| | || || | |||||||| |||||| | || ||||| |||||||| | || |||
Sbjct: 850 atacttgttgagttatgctcgggtgaagcactgttccagacacatgagaacctggaacat 909
Query: 988 ttggccatgatggagagggttttaggacca 1017
||||| |||||||||||||| || ||||||
Sbjct: 910 ttggcaatgatggagagggtattgggacca 939
Score = 105 bits (53), Expect = 7e-22
Identities = 164/201 (81%)
Strand = Plus / Plus
Query: 487 aactggtttgattatcgtaaccatatctgtattgtatttgagatgcttggaccaagcttg 546
|||||||||||||| || || ||||| |||||||||||||||| |||||||||||| ||
Sbjct: 418 aactggtttgattaccgcaatcatatatgtattgtatttgagaagcttggaccaagttta 477
Query: 547 tatgattttcttcggaaaaataattatcgcccatttccggttgatcttgtccgtgagctt 606
| ||||||||| || |||||| || ||||||| || || |||||||| || || ||
Sbjct: 478 tttgattttctaaagagaaataaatactgcccattccctgtggatcttgtgcgggaattt 537
Query: 607 ggcagacaactcttggaatgtgtagcattcatgcatgatttgcgcctaatccatacagac 666
|| | || || ||||||| |||||||| ||||||||||| |||||||| || || |||
Sbjct: 538 ggacgtcagcttttggaatctgtagcatatatgcatgatttacgcctaattcacactgac 597
Query: 667 ttgaaaccagagaacatactt 687
||||| ||||| || ||||||
Sbjct: 598 ttgaagccagaaaatatactt 618