Jatropha Genome Database
- JcCB0002291.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0002291.20 + phase: 0 /pseudo/partial
(2128 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005466 catalytic, putative 930 0.0
29912.m005465 catalytic, putative 143 5e-33
56072.m000044 conserved hypothetical protein 115 1e-24
29794.m003378 catalytic, putative 94 4e-18
29794.m003379 catalytic, putative 68 2e-10
30101.m000387 catalytic, putative 54 4e-06
>29912.m005466 catalytic, putative
Length = 1005
Score = 930 bits (469), Expect = 0.0
Identities = 814/929 (87%)
Strand = Plus / Plus
Query: 844 tctaagatgaggggaatatatgcgtctgaaggatggtttatgaaactgttggagggaaac 903
||||||||||||||||||||||| || ||||||||||||||||||| | || ||||||
Sbjct: 61 tctaagatgaggggaatatatgcatcagaaggatggtttatgaaacatatagaaggaaac 120
Query: 904 aaaaagttcgtagtgagggaccctagaaaagctcacttgttctacttgccatttagtccg 963
|||||||| |||||| ||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 121 aaaaagtttttagtgaaggaccctagaaaagctcacttattcttcttgccatttagtcct 180
Query: 964 catatgttaaggactgagctatttggacaaaaatttcagagtcaaaaggaccttggagta 1023
|| ||||||||||||| | |||||||||| ||| ||||||| || |||||||||| || |
Sbjct: 181 caaatgttaaggactgtgatatttggacagaaacttcagagccagaaggaccttgaagaa 240
Query: 1024 tatttgaagaactacgtggatttagttgcacaaaagtatattttctggaacagaacagga 1083
|||||||||||||| |||||||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 241 tatttgaagaactatgtggatttagttgcacgaaagtatagtttctggaatagaacagga 300
Query: 1084 ggagcagatcattttcttgtaggctgtcatgactgggcctctcaaatcacaaggcagcat 1143
||| |||||||||||||||| ||||||||||||||||| |||| ||||| ||| || ||
Sbjct: 301 ggaacagatcattttcttgttggctgtcatgactgggcatctcgtatcactaggaagtat 360
Query: 1144 atgaagaattgtatcagagttctttgtaacgccaatgttggtaaaggcttcaaaataggg 1203
||| | || || ||||||||||| ||||| |||||||||| ||| || || |||||||||
Sbjct: 361 atgcaaaactgcatcagagttctctgtaatgccaatgttgctaagggatttaaaataggg 420
Query: 1204 aaggatactactctgccagtcacatacattcggtctgctgagaaccctctaaaagatctt 1263
|||||||| ||||| ||||| |||||||| || ||||||||||||||||| |||||| ||
Sbjct: 421 aaggatacgactcttccagttacatacatacgttctgctgagaaccctcttaaagatgtt 480
Query: 1264 ggaggaaggcctccttctgaaaggcctattctggccttctttgcaggaggcatgcacggt 1323
||||||| | |||||| |||||| || ||| ||||| ||||||||||| ||||| |||
Sbjct: 481 ggaggaaaacatccttcagaaaggtatactctagccttttttgcaggaggtatgcatggt 540
Query: 1324 tacctgcgaccaatcctgctgcagttctgggagaacaaagaatctgacatgaaaatcttt 1383
|| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 541 tatctgcgaccaatcctggtgcagttctgggagaataaagaatctgacatgaaaatcttt 600
Query: 1384 ggcccaatgccacgtgatactgaagggaaatggttatacagagagtacatgaagagcagc 1443
|| || ||||| ||||||| |||||||||| | |||||||| |||||||||||||| |||
Sbjct: 601 ggtcccatgccccgtgatattgaagggaaaagattatacagggagtacatgaagagtagc 660
Query: 1444 aagtattgcatatgtgccagaggttacgaagttcacactcctcgcatagttgaggccatc 1503
||||||||||||||||| || || || ||||||||||||||||| |||||||| |||||
Sbjct: 661 aagtattgcatatgtgctaggggctatgaagttcacactcctcgtatagttgaagccatt 720
Query: 1504 ttgtacgagtgtgtcccagtcatcatatcagatagttacgtacctccctttttcgaggtt 1563
|| ||||||||||||||||||||||||||||||| ||| || || || ||||| ||||||
Sbjct: 721 ttatacgagtgtgtcccagtcatcatatcagataattatgtgcccccattttttgaggtt 780
Query: 1564 ttgaactgggaagcatttgctgtgtttgtgcaggagaaagatattcctaatttgagaaac 1623
||||||||||| |||||| |||| |||||||| |||||||||||||| |||||||| | |
Sbjct: 781 ttgaactgggaggcattttctgtatttgtgcaagagaaagatattccaaatttgaggagc 840
Query: 1624 attctactctcaatcccaaaagagaagtactttatgctgcagtcaagtgttaagatggtg 1683
||||| ||||||||||| ||||||||||| || | |||||| ||| |||||||||||
Sbjct: 841 attctgctctcaatccctgaagagaagtaccttgagatgcagttaagagttaagatggta 900
Query: 1684 caacaacatttcctctggcataaaaaccctgtgaagtatgatatattccatatgattctt 1743
||||| ||||| || ||||| ||||||||||||||||||||| |||| |||||||| |||
Sbjct: 901 caacagcattttctttggcacaaaaaccctgtgaagtatgatctatttcatatgatcctt 960
Query: 1744 cactcagtttggtataacagaatctttca 1772
|| || |||||| | ||||||||||||||
Sbjct: 961 cattctgtttggcacaacagaatctttca 989
>29912.m005465 catalytic, putative
Length = 2031
Score = 143 bits (72), Expect = 5e-33
Identities = 215/262 (82%), Gaps = 3/262 (1%)
Strand = Plus / Plus
Query: 1805 atggagttccggtttcattttcataaattatgccaaattgaaagaag---atggcttctt 1861
|||||||| ||||||| ||||||||| | ||||| ||||||| || ||||||||||
Sbjct: 1 atggagttgaggtttcagtttcataaactttgccagattgaaaccaggaaatggcttctt 60
Query: 1862 ctggtgggtgcagtggctattactcatttactgtttcaatctctattgcttccatatgga 1921
| || || ||||||||| |||||||| | |||||||||| |||||||||||| ||||||
Sbjct: 61 gttgttggagcagtggctgttactcatattctgtttcaatttctattgcttccttatgga 120
Query: 1922 aatgctcttcgttctttattacccaatagcaatgaaccagtacaagatacaagcagcttt 1981
|||||||| | || ||||| |||||||| | ||| ||| | | |||| ||| ||||||
Sbjct: 121 aatgctctcaggtcattattgcccaatagtagtgacccaatttatgataaaagtagcttt 180
Query: 1982 ccaatcttacaatcttccacaaagtctgtcatggttcgcaatgctctcacagttgatact 2041
||||| ||||||||||||| || ||||| |||||| | ||| |||| || |||||||||
Sbjct: 181 ccaattatacaatcttccactaaatctgtgatggttaggaatcctcttaccgttgatact 240
Query: 2042 tctagctcgagtaaagtttcca 2063
|| |||| |||||||| |||||
Sbjct: 241 tccagcttgagtaaagattcca 262
Score = 60.0 bits (30), Expect = 6e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1065 tttctggaacagaacaggaggagcagatcattttcttgtaggctgtcatgactgggcc 1122
||||||||||||||| | |||||||||||||||||||||| || ||||| ||||||
Sbjct: 1308 tttctggaacagaactgatggagcagatcattttcttgtagcttgccatgattgggcc 1365
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 862 tatgcgtctgaaggatggtttatgaaactgttggagggaaacaaa 906
||||| || ||||||||||||||||||||| || |||||||||||
Sbjct: 1105 tatgcctcagaaggatggtttatgaaactgatgcagggaaacaaa 1149
>56072.m000044 conserved hypothetical protein
Length = 945
Score = 115 bits (58), Expect = 1e-24
Identities = 223/278 (80%)
Strand = Plus / Plus
Query: 58 atggtaatcagcgtggcaattattattgctgctctttttcagtgttttgcgcttcactat 117
||||| |||||| ||| |||||||||| ||||||||||||| ||||| | |||| ||||
Sbjct: 58 atggttatcagcttggttattattattggtgctctttttcagggtttttcacttccctat 117
Query: 118 gggaaaagattgttcctctcgtcggctaatgagggttctatagttatgctgatcagcaac 177
||||| || | |||||| | ||| ||||||||||||| || ||| ||||||||||
Sbjct: 118 aagaaaacgttttccctctcaccagctgatgagggttctatcgtaatgttgatcagcaat 177
Query: 178 gccactttttcaaataattcaagaccaagaccaatctatgtatctaatattatagcaaat 237
|||||||| |||||||||| | |||||| |||||| ||| | |||| ||||||||||
Sbjct: 178 gccactttctcaaataatttagaaccaaggccaatcattgtgtataatgctatagcaaat 237
Query: 238 gctacttattcctccgatttggctgaggaagttggagaagagaataaaacaaaagccaca 297
|||| |||||| ||||||| | | ||||||| ||| |||||| ||||||||| | ||
Sbjct: 238 catactcattcctttgatttggataaagaagttgaagatgagaatgaaacaaaaggcgca 297
Query: 298 agtgtagacattgatttgtcatcagataagaatgaaca 335
| | ||| |||||||||||||||| | ||||||||
Sbjct: 298 gatatggactctgatttgtcatcagatgaaaatgaaca 335
Score = 83.8 bits (42), Expect = 4e-15
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 712 acatcaatatcccagatgaatttgctattacttcagagtttttcttcatctcataatatg 771
|||||||||||||||||||||| || || |||||||||||| ||||||||||||| ||
Sbjct: 751 acatcaatatcccagatgaattcactgttgcttcagagttttgtttcatctcataatgtg 810
Query: 772 aggccaaagtggtcttccgcgcgtgatcgtgaacttttgtctgccaaactaaagatagag 831
| ||| ||||| |||| || ||||||| ||||| | ||||| ||| | |||||| ||
Sbjct: 811 aagccccagtgggcttcagcatgtgatcgccaacttctatctgcaaaattgaagatacag 870
Query: 832 aatgctccta 841
||||||||||
Sbjct: 871 aatgctccta 880
>29794.m003378 catalytic, putative
Length = 1806
Score = 93.7 bits (47), Expect = 4e-18
Identities = 170/211 (80%)
Strand = Plus / Plus
Query: 1430 acatgaagagcagcaagtattgcatatgtgccagaggttacgaagttcacactcctcgca 1489
||||||||||||||| || || || ||||| |||||||| ||||| | | ||| | |
Sbjct: 1448 acatgaagagcagcagatactgtatctgtgcaagaggttatgaagtcaatagtccgagaa 1507
Query: 1490 tagttgaggccatcttgtacgagtgtgtcccagtcatcatatcagatagttacgtacctc 1549
| || |||||||| || ||||||||||| ||||| || |||||||| | ||| || || |
Sbjct: 1508 ttgtggaggccattttatacgagtgtgttccagtgattatatcagacaattatgtgcccc 1567
Query: 1550 cctttttcgaggttttgaactgggaagcatttgctgtgtttgtgcaggagaaagatattc 1609
| ||||| || ||| ||||||||||| | |||||||| |||||| ||||||||||||||
Sbjct: 1568 cattttttgaagttctgaactgggaatcctttgctgtttttgtgttggagaaagatattc 1627
Query: 1610 ctaatttgagaaacattctactctcaatccc 1640
| ||||||| ||||| || || ||||||||
Sbjct: 1628 cgaatttgaagaacatactcctttcaatccc 1658
>29794.m003379 catalytic, putative
Length = 1371
Score = 67.9 bits (34), Expect = 2e-10
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1721 atgatatattccatatgattcttcactcagtttggtataacagaatctttcaaa 1774
||||| |||| |||||||||||||||||||||||||| |||||| | |||||||
Sbjct: 1304 atgatttatttcatatgattcttcactcagtttggtacaacagagtttttcaaa 1357
>30101.m000387 catalytic, putative
Length = 1587
Score = 54.0 bits (27), Expect = 4e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1483 cctcgcatagttgaggccatcttgtacgagtgtgtcccagtcatcat 1529
||||| || ||||||||||||| ||||||||||| |||||||||||
Sbjct: 1276 cctcggattgttgaggccatctattacgagtgtgttccagtcatcat 1322