Jatropha Genome Database

JcCB0001411.50
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0001411.50 - phase: 0 /pseudo/partial
         (588 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29762.m000496 ubiquitin-activating enzyme E1, putative                252   2e-66

>29762.m000496 ubiquitin-activating enzyme E1, putative
          Length = 1404

 Score =  252 bits (127), Expect = 2e-66
 Identities = 409/507 (80%), Gaps = 17/507 (3%)
 Strand = Plus / Plus

                                                                        
Query: 99   gtcaagataagaggcaggtcattgaattgtgaagtttgtggagaaaatgcagcatttaat 158
            |||||||| || || ||||||||  | || |||||||||||||||||| |||||||||  
Sbjct: 895  gtcaagattaggggtaggtcattacaatgcgaagtttgtggagaaaattcagcatttacc 954

                                                                        
Query: 159  gaaaagcaatttagagattttgattatgagaagtttactcagtctccattgtccacg--- 215
             ||||||||||||||||||| |||||||||||||| |||||| |||||||||| | |   
Sbjct: 955  caaaagcaatttagagatttcgattatgagaagttcactcagactccattgtcaatggct 1014

                                                                        
Query: 216  --------------cctgctttcagcaggctccagaataacctgtaaagacttcaatgag 261
                          ||||||| ||||||  |||||||||| | ||| ||| |||||||||
Sbjct: 1015 cccttgaagttggacctgcttccagcagattccagaataaacagtagagagttcaatgag 1074

                                                                        
Query: 262  aaagttgttaaaggggaagcgcacgtgttggtagatgtacgccctgcccaccatttcaag 321
            |||||  ||||||||||| | || || |||||||| ||||||||||| ||||||||||||
Sbjct: 1075 aaagtgattaaaggggaaacacatgtcttggtagacgtacgccctgctcaccatttcaag 1134

                                                                        
Query: 322  attgttgctcttcccaatgccttgaacattccattaacaagtttggaggctaggttgcct 381
            ||||||||||||||||| ||| | || || ||| || | ||| |||| || |||||||||
Sbjct: 1135 attgttgctcttcccaacgccctaaatataccactatctagtctggaagccaggttgcct 1194

                                                                        
Query: 382  gaaatctcatccgcattgaaggaagcaggaggctgcagaggtactgaatcagaatcaggc 441
            |||||||| || || ||||||||||  ||||   |||| |||  ||| ||||||||||| 
Sbjct: 1195 gaaatctcttcagctttgaaggaagagggagagcgcaggggtgttgattcagaatcaggt 1254

                                                                        
Query: 442  gtgagcctatacatagtatgtagaagagggaatgattcgcagagggccgttcaaatgtta 501
            |||| | ||||  |||||||||||||||| || ||||| || || || |||||| | |||
Sbjct: 1255 gtgaacttatatgtagtatgtagaagaggaaacgattcacaaagagctgttcaattatta 1314

                                                                        
Query: 502  cacagcaagggctttacttcagctaaagatatcattggaggcttggaggcctggtcccat 561
            ||||  || ||||||| |  ||| || ||||||||||| ||| | ||||||||| | |||
Sbjct: 1315 cacaagaaaggctttagtatagccaaggatatcattgggggcatagaggcctgggcacat 1374

                                       
Query: 562  gatgtagatccaaaattccctacctat 588
            |||||||||||||| ||||||||||||
Sbjct: 1375 gatgtagatccaaatttccctacctat 1401