Jatropha Genome Database
- JcCB0001131.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0001131.30 + phase: 0 /partial
(778 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m014140 gibberellin 20-oxidase, putative 392 e-108
30174.m008931 gibberellin 20-oxidase, putative 92 6e-18
>30147.m014140 gibberellin 20-oxidase, putative
Length = 1137
Score = 392 bits (198), Expect = e-108
Identities = 561/682 (82%)
Strand = Plus / Plus
Query: 89 gatacaaatctaacgttccccaacagttcatttggcctgaccatgaaaagccaaccgcta 148
||||| |||| ||| |||||||||| || | ||||| || |||||||||||| || |
Sbjct: 104 gataccaatcaaacattccccaacaatttgtatggccggatgatgaaaagccaatcgtca 163
Query: 149 atgcaccagaactccctgttccacatatcgacttaggtggtttcctttccggcgaccctg 208
||||||||||||| ||||||| | |||||||||||||| ||| | || || |||||||
Sbjct: 164 atgcaccagaactggctgttccgctaatcgacttaggtgggttcttgtctggtgaccctg 223
Query: 209 tcgctgcaatggaggcttctaagcttgttggcgaagcttgcaagaaacatggtttctttc 268
| |||||| ||| ||||| ||||| |||||||| || || | || || |||||||| |
Sbjct: 224 tttctgcaacggaagcttcaaagctagttggcgaggcatgtcaaaagcacggtttcttcc 283
Query: 269 tcgtcgttaatcacggcgtcaatcaaaaactgatacaagatgcccatcgctatatggaca 328
| || ||||| ||||| || ||||||| || ||| ||||| || || || |||||||
Sbjct: 284 ttgttgttaaccacggtgttgatcaaaagctcatagctgatgcgcaccgttacatggaca 343
Query: 329 gcttctttgaattacctctctgtgaaaagcaaaaagctcagaggaaaattggcgagcact 388
|||||||||||| || |||| || ||||| ||||||||||||||| |||| |||||||
Sbjct: 344 acttctttgaattgccactctccgataagcagaaagctcagaggaaagttggtgagcact 403
Query: 389 gtggatatgccagtagcttcactggcaggttttcttctaaacttccatggaaagaaactg 448
|||| ||||| |||||||| ||||||||||| || |||||||||| |||||||||||
Sbjct: 404 gtggttatgctagtagctttactggcaggttctccactaaacttccttggaaagaaacac 463
Query: 449 tttctgttcgctactcggctgacaataactcacccaaactcgttcaacactatctccgta 508
||||| ||||||| || || | | |||||||| ||||| || ||| ||||| | | ||
Sbjct: 464 tttcttttcgctattctgcccagcagaactcaccaaaacttgtgcaagactattttcata 523
Query: 509 acacaatgggcgaaactttctcagaattcgggagggtgtaccaggagtactgcgaggcga 568
|||||||||| ||| |||| | |||||||||| ||| |||||| ||||||||||||| |
Sbjct: 524 acacaatgggtgaatcttttttggaattcgggaaggtctaccagcagtactgcgaggcta 583
Query: 569 tgagcactctatcactgggaatcatggaactacttggaatgagccttggagtaagcagag 628
|||||||||| ||| | |||||||||||||| | ||||||||| | |||||||||| ||
Sbjct: 584 tgagcactctttcattaggaatcatggaacttttgggaatgagcttgggagtaagcaaag 643
Query: 629 agcacttcagggaattttttgaagaaaacgattctataatgaggcttaattactatcctc 688
|||||||||||||||||||||||||||||||| ||||||||||| || || ||||| |
Sbjct: 644 cccacttcagggaattttttgaagaaaacgattcaataatgaggctgaactattatccac 703
Query: 689 aatgccaaaaacctgatcttaccttaggaaccggtcctcattgcgatcctacttcattaa 748
|| ||||||||||| ||||| |||||||| || |||||||||||||| || |||||||
Sbjct: 704 cgtgtcaaaaacctgaccttactttaggaactggacctcattgcgatcccacatcattaa 763
Query: 749 ccattcttcaccaagaccaagt 770
|||| ||||||||||| |||||
Sbjct: 764 ccatccttcaccaagatcaagt 785
>30174.m008931 gibberellin 20-oxidase, putative
Length = 1170
Score = 91.7 bits (46), Expect = 6e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 385 cactgtggatatgccagtagcttcactggcaggttttcttctaaacttccatggaaagaa 444
|||||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 430 cactgtggatatgcaagtagcttcactggaaggttttcctcaaaacttccatggaaagaa 489
Query: 445 ac 446
||
Sbjct: 490 ac 491
Score = 54.0 bits (27), Expect = 1e-06
Identities = 105/131 (80%)
Strand = Plus / Plus
Query: 634 ttcagggaattttttgaagaaaacgattctataatgaggcttaattactatcctcaatgc 693
||||| ||||| ||||||| || ||||| |||||||| | || |||||||||| |||
Sbjct: 679 ttcagagaattctttgaagggaatgattccataatgagattgaactactatcctccttgc 738
Query: 694 caaaaacctgatcttaccttaggaaccggtcctcattgcgatcctacttcattaaccatt 753
|||||||||||| | || | ||||| |||||||| || || || ||||| || || |||
Sbjct: 739 caaaaacctgatttaactcttggaactggtcctcactgtgacccaacttccttgacgatt 798
Query: 754 cttcaccaaga 764
||||| |||||
Sbjct: 799 cttcatcaaga 809