Jatropha Genome Database

JcCB0001101.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0001101.20 + phase: 0 
         (237 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29945.m000087 Ubiquinol-cytochrome c reductase complex ubiquinon...   107   3e-23

>29945.m000087 Ubiquinol-cytochrome c reductase complex
           ubiquinone-binding protein QP-C, putative
          Length = 279

 Score =  107 bits (54), Expect = 3e-23
 Identities = 114/134 (85%)
 Strand = Plus / Plus

                                                                       
Query: 22  atgaaggcggtggtttacgctctttcgccatttcagcagaagataatgcctggtttatgg 81
           |||||||| ||| | ||| | ||||| |||||||| |||||| ||||| | ||| | |||
Sbjct: 1   atgaaggcagtgatatactcactttcaccatttcaacagaaggtaatgacaggtctctgg 60

                                                                       
Query: 82  aaggatctgcctaacaagatccatcacaaggtgtcagagaactggatcagcgccaccctc 141
           || ||||| ||| |||||||||| |||||||| || |||||||||||||||||||| |||
Sbjct: 61  aaagatctccctgacaagatccaccacaaggtctccgagaactggatcagcgccacactc 120

                         
Query: 142 cttctcacccctct 155
           |||||| |||||||
Sbjct: 121 cttctcgcccctct 134