Jatropha Genome Database
- JcCB0000871.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0000871.20 - phase: 0 /partial
(1386 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29688.m000267 Peptide transporter, putative 167 2e-40
29688.m000263 conserved hypothetical protein 109 5e-23
29688.m000265 Peptide transporter, putative 101 1e-20
29688.m000264 transporter, putative 58 1e-07
>29688.m000267 Peptide transporter, putative
Length = 1701
Score = 167 bits (84), Expect = 2e-40
Identities = 216/260 (83%)
Strand = Plus / Plus
Query: 1016 ctacagtgcctatgctcgccatatggctatttgcacaactaattcttgttggtattggag 1075
|||| ||||||||||| ||| | ||||||||| | ||||||||| | ||||| |||||||
Sbjct: 1322 ctactgtgcctatgctggccctgtggctatttccgcaactaattttagttggaattggag 1381
Query: 1076 aagcatttcattttccaggacaagttgcagtttattaccaggaatttccagattcactgc 1135
|||||||||| |||||||| |||||||| | |||||||||||||||||| ||| |||
Sbjct: 1382 aagcatttcactttccagggcaagttgctttatattaccaggaatttccaatctcaatgc 1441
Query: 1136 gtagtgcagcaactgctatgatctctttaattattggaatttctttttatttaagcacaa 1195
||| | |||||||||||||| ||||| ||| |||| || ||||| |||||||||||
Sbjct: 1442 gtaacacggcaactgctatgatatctttgattgttgggatatctttctatttaagcacgg 1501
Query: 1196 ctttgattgatcttattaaaaggtttacaaactggttacctgataatattgatcatggaa 1255
||||||| ||||| ||| |||| ||||| | ||||| || |||||||| ||| |||| |
Sbjct: 1502 ctttgatcgatctggttagaagggttacagattggttgccggataatatagatgatggga 1561
Query: 1256 ggctagataatgtgtattgg 1275
|| | |||||||||||||||
Sbjct: 1562 ggattgataatgtgtattgg 1581
Score = 58.0 bits (29), Expect = 1e-07
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 79 tgccaaactccatcaaaactccaatacacagtactatatggagcttttgctcttggatct 138
||||||||||||| ||||| |||||| |||||||||||||||| || | ||| ||||
Sbjct: 388 tgccaaactccattaaaaccccaatatgcagtactatatggagccttggttctgacatct 447
Query: 139 ttagggttaggaggaacaagatttacaatagcaacaatgggagcaaaccaatt 191
|||| || |||||| | | | | | |||||||||||||||||||||||||
Sbjct: 448 ataggctttggaggatctcggtattctttagcaacaatgggagcaaaccaatt 500
>29688.m000263 conserved hypothetical protein
Length = 459
Score = 109 bits (55), Expect = 5e-23
Identities = 175/215 (81%)
Strand = Plus / Plus
Query: 1063 gttggtattggagaagcatttcattttccaggacaagttgcagtttattaccaggaattt 1122
||||| || |||||||||||||||||||| ||||||||||| | |||||| | ||||||
Sbjct: 127 gttggaatgggagaagcatttcattttcctggacaagttgctttatattacaaagaattt 186
Query: 1123 ccagattcactgcgtagtgcagcaactgctatgatctctttaattattggaatttctttt 1182
|||| ||||| ||||| || ||||||||| || |||| ||| |||| | |||||
Sbjct: 187 ccagtctcactccgtaggacaagaactgctataattgcttttattgttggggtatctttc 246
Query: 1183 tatttaagcacaactttgattgatcttattaaaaggtttacaaactggttacctgataat 1242
|||||||||||| |||||||| |||| || ||| ||||| | |||||||| ||||||
Sbjct: 247 tatttaagcacagctttgattcctcttgttcgaagtgttacagattggttaccggataat 306
Query: 1243 attgatcatggaaggctagataatgtgtattgggt 1277
|| ||| |||||||| | ||||||| |||||||||
Sbjct: 307 atagatgatggaaggattgataatgcgtattgggt 341
>29688.m000265 Peptide transporter, putative
Length = 1686
Score = 101 bits (51), Expect = 1e-20
Identities = 192/239 (80%)
Strand = Plus / Plus
Query: 1039 tggctatttgcacaactaattcttgttggtattggagaagcatttcattttccaggacaa 1098
||||||||| | |||||| || | ||||| ||||||||||||||||||||||| || |||
Sbjct: 1324 tggctatttccgcaactagttttggttggaattggagaagcatttcattttcctgggcaa 1383
Query: 1099 gttgcagtttattaccaggaatttccagattcactgcgtagtgcagcaactgctatgatc 1158
||||| | |||||| | |||||||||| ||||||||||| | | |||||||| ||
Sbjct: 1384 gttgctttatattacaaagaatttccagtctcactgcgtagcacgggaactgctacaatt 1443
Query: 1159 tctttaattattggaatttctttttatttaagcacaactttgattgatcttattaaaagg 1218
|||| ||| |||| || ||||| |||||||||||| ||||||||| || || |||
Sbjct: 1444 acttttattgttgggatatctttctatttaagcacagctttgattgcgctggttcgaagt 1503
Query: 1219 tttacaaactggttacctgataatattgatcatggaaggctagataatgtgtattgggt 1277
||||| | |||||||| |||||||| || |||| ||| | ||||||||||| |||||
Sbjct: 1504 gttacagattggttaccggataatatagacaatgggaggattgataatgtgtactgggt 1562
Score = 54.0 bits (27), Expect = 2e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 891 attccaaagagtagcaataggccatgtgattaatgtgctaagcttggctatgtcagcgtt 950
|||||||| ||||| | ||||||||||| |||||||||||||| ||| | ||||| ||
Sbjct: 1203 attccaaatagtaggagtaggccatgtgcttaatgtgctaagcatggtggtttcagcttt 1262
Query: 951 agtggagtcaaggag 965
|| |||||||||||
Sbjct: 1263 ggtagagtcaaggag 1277
>29688.m000264 transporter, putative
Length = 1143
Score = 58.0 bits (29), Expect = 1e-07
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 367 aatcgattgtatagacgtgataagccccagggaagcccattcactggcttagcacgtgta 426
|||||||| ||| | | ||||||||| | |||||||||||||| |||||||| ||||||
Sbjct: 577 aatcgattatatcggcatgataagccagaaggaagcccattcacaggcttagctcgtgta 636
Query: 427 gttattgct 435
||| |||||
Sbjct: 637 gttgttgct 645