Jatropha Genome Database
- JcCB0000871.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0000871.10 - phase: 0
(1701 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29688.m000267 Peptide transporter, putative 119 6e-26
29688.m000264 transporter, putative 78 2e-13
29688.m000265 Peptide transporter, putative 72 1e-11
29739.m003639 conserved hypothetical protein 64 3e-09
>29688.m000267 Peptide transporter, putative
Length = 1701
Score = 119 bits (60), Expect = 6e-26
Identities = 678/880 (77%), Gaps = 8/880 (0%)
Strand = Plus / Plus
Query: 700 agcccattcactggcttagcacgtgtagttgttgctgctatacgaaagaggaaggcctta 759
|||||||| || | |||||| || |||||||||||| ||||| ||||||||||| | |
Sbjct: 709 agcccatttacagccttagctcgcgtagttgttgctactataaaaaagaggaaggtcctg 768
Query: 760 ttgtcttctacgagtggtgactattactttgaggatgatttaaaaggaaaagatgtctct 819
|| ||||| | ||||| |||||||||| |||| |||| ||| | ||| || | ||
Sbjct: 769 ttatcttccaggagtgaggactattactatgagaatgacgcaaaggcaaaggaggcagct 828
Query: 820 gcttcaattactaatagtttcaggtttttgaatcgagcagcactaaaagctgaaggagat 879
||| || | || || || |||||||| || || ||||||||| | ||| ||||||| ||
Sbjct: 829 gctacagtgacaaagagcttcaggttcttcaaccgagcagcaatgaaaactgaaggtgac 888
Query: 880 acaaaaactgatgggtcaattgcaaaaccctggaaactatgttctgtacaacaagttgaa 939
| ||| | ||||| || ||||||||||| |||| | | || || ||||| ||||| |||
Sbjct: 889 atcaaaccagatggatccattgcaaaaccatggagaatctgctcagtacagcaagtagaa 948
Query: 940 gatttcaaggctctaataaggattttccccatatggtcaacatcaatatttttaagcact 999
||||||||| | ||||| | |||||||| ||||||||| | ||||| ||| |||||
Sbjct: 949 gatttcaagacactaatcggaattttcccaatatggtcatccagtatattcttaggcact 1008
Query: 1000 ccaatagcaatgcaaaccagcttaaatgtgcttcaagctctgacaatggatcgtagactc 1059
||||||||||| ||| | ||||| | ||| || |||||||| | ||||| || | |||
Sbjct: 1009 ccaatagcaatccaatcaagcttgactgtactccaagctctagccatggaccgacgcctc 1068
Query: 1060 ggacaccattttaaaatcccagctggctctatttcaatcgtcataacactgattagtact 1119
||||| ||||| ||||||||||| |||||| || || ||| ||| |||||| | ||
Sbjct: 1069 ggacaacatttcaaaatcccagcaggctctgtt---atagtcttaatactgataacaaca 1125
Query: 1120 tccatttttctcaccataaatgatcgggttctctttcgaatatggcaaaagctaatgcga 1179
||||||| ||||||| | | ||||||||| ||| || | |||| | ||||| |
Sbjct: 1126 tccatttgtctcaccttcatcgatcgggttttctatcccttttggcggatgctaacacac 1185
Query: 1180 aaatcgcccactctattccaaagaatcggaataggccatatgcttaatgtgctaagcatg 1239
||| || || | |||||||||||| ||| |||||||| | |||||||||||||||||
Sbjct: 1186 aaacttccgacgccattccaaagaataggagtaggccatgtatttaatgtgctaagcatg 1245
Query: 1240 ggagtatcagctttagtggagtcaaagagacttagactagctcatgctcaacaatcagct 1299
|| || |||||||| || ||||||| || || ||| ||| ||||||||||| | || |
Sbjct: 1246 ggtgtttcagctttggtagagtcaagaaggctaagaataggtcatgctcaac-accatca 1304
Query: 1300 ag-tggcaaagaaaactctactatagtgcctatgctcgtcctatggttatttccacaact 1358
|| || | || | |||||| ||||||||||| | ||| ||| ||||||| |||||
Sbjct: 1305 agatgatcaggatagttctact---gtgcctatgctggccctgtggctatttccgcaact 1361
Query: 1359 aattctagctggtattggagaatcatttcattttccagcacaagttgagctttattacca 1418
|||| ||| ||| ||||||||| ||||||| ||||||| ||||||| | ||||||||
Sbjct: 1362 aattttagttggaattggagaagcatttcactttccagggcaagttgctttatattacca 1421
Query: 1419 ggagtttcctgattcactgcgcagtacagcaactgctatgatgtctttaattatcgggat 1478
||| ||||| ||| |||| | || |||||||||||||| ||||| ||| | |||||
Sbjct: 1422 ggaatttccaatctcaatgcgtaacacggcaactgctatgatatctttgattgttgggat 1481
Query: 1479 ttctttttatttaggcacaattctgattgatcttattagaagggtcacaaactggttacc 1538
||||| |||||| |||| | |||| ||||| |||||||||| ||| | ||||| ||
Sbjct: 1482 atctttctatttaagcacggctttgatcgatctggttagaagggttacagattggttgcc 1541
Query: 1539 gaataatcttgatcatggaaggctagataatgtgtattgg 1578
| ||||| | ||| |||| ||| | |||||||||||||||
Sbjct: 1542 ggataatatagatgatgggaggattgataatgtgtattgg 1581
Score = 83.8 bits (42), Expect = 3e-15
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 213 tttatttcctatagttggagctatagttgctgactctttcttgggttctttctctgttat 272
|||||||||||| | ||||||||||||||||||||||||||||| |||| | ||| |
Sbjct: 225 tttatttcctatcgccggagctatagttgctgactctttcttgggcaatttcaccgttgt 284
Query: 273 caccatatcttcttgtgtttcttttctggg 302
||| || ||||||||||| |||||||||||
Sbjct: 285 cactatctcttcttgtgtctcttttctggg 314
>29688.m000264 transporter, putative
Length = 1143
Score = 77.8 bits (39), Expect = 2e-13
Identities = 165/207 (79%)
Strand = Plus / Plus
Query: 889 gatgggtcaattgcaaaaccctggaaactatgttctgtacaacaagttgaagatttcaag 948
|||||||| |||||||||||||||| | | || || ||||| ||||| ||||||||||||
Sbjct: 802 gatgggtccattgcaaaaccctggagaatctgctcagtacagcaagtagaagatttcaag 861
Query: 949 gctctaataaggattttccccatatggtcaacatcaatatttttaagcactccaatagca 1008
| ||||| || | |||||| ||||||||| || |||||| | |||||||||||||
Sbjct: 862 acactaatcagaactttcccaatatggtcatcaaatatatttgttgccactccaatagca 921
Query: 1009 atgcaaaccagcttaaatgtgcttcaagctctgacaatggatcgtagactcggacaccat 1068
| ||| | ||||| | ||| || |||||||| | ||||| | | || ||||| |||
Sbjct: 922 gtccaagcaagcttgactgtactccaagctctagccatggaccttcaccttggacaacat 981
Query: 1069 tttaaaatcccagctggctctatttca 1095
|| |||||||||||||||||||||||
Sbjct: 982 ttccaaatcccagctggctctatttca 1008
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 700 agcccattcactggcttagcacgtgtagttgttgctgctat 740
||||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 610 agcccattcacaggcttagctcgtgtagttgttgctactat 650
>29688.m000265 Peptide transporter, putative
Length = 1686
Score = 71.9 bits (36), Expect = 1e-11
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 215 tatttcctatagttggagctatagttgctgactctttcttgggttctttctctgttatca 274
|||||||||| |||||||||||| | ||||| ||||||||||| ||||| ||| ||
Sbjct: 227 tatttcctattgttggagctatactagctgattctttcttgggaaacttctccgttgtcg 286
Query: 275 ccatatcttcttgtgtttcttttctggg 302
| |||||||||||||| |||||||||||
Sbjct: 287 ctatatcttcttgtgtctcttttctggg 314
Score = 61.9 bits (31), Expect = 1e-08
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1194 attccaaagaatcggaataggccatatgcttaatgtgctaagcatgggagtatcagcttt 1253
|||||||| | | ||| |||||||| ||||||||||||||||||||| || ||||||||
Sbjct: 1203 attccaaatagtaggagtaggccatgtgcttaatgtgctaagcatggtggtttcagcttt 1262
Query: 1254 agtggagtcaa 1264
|| |||||||
Sbjct: 1263 ggtagagtcaa 1273
>29739.m003639 conserved hypothetical protein
Length = 345
Score = 63.9 bits (32), Expect = 3e-09
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 215 tatttcctatagttggagctatagttgctgactctttcttgggttctttctctgttatca 274
|||||||||| |||||||| ||| | ||||| ||||||||||| | ||||| | | ||
Sbjct: 128 tatttcctattgttggagccatactagctgattctttcttgggatacttctccgctgtcg 187
Query: 275 ccatatcttcttgtgtttcttttctggg 302
| |||||||||||||| |||||||||||
Sbjct: 188 ctatatcttcttgtgtctcttttctggg 215