Jatropha Genome Database
- JcCA0317991.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317991.20 + phase: 0
(990 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003680 DNA repair protein rad51, putative 805 0.0
>29739.m003680 DNA repair protein rad51, putative
Length = 885
Score = 805 bits (406), Expect = 0.0
Identities = 547/594 (92%)
Strand = Plus / Plus
Query: 52 gaacttgaggagatgcaacatggccctttccctgttgagcagctacaagagtcgggaatt 111
|||||||| || ||||| |||||||||||||||||||| ||||| || ||||| |||||
Sbjct: 46 gaacttgatgaaatgcagcatggccctttccctgttgaacagctccaggagtcaggaatc 105
Query: 112 gctgcccttgatattaaaaagcttaaagatgctggtctctgcactgttgagtctgtcgct 171
||||||||||| |||| ||||||||||||||||||||||| || ||||||||||| |||
Sbjct: 106 gctgcccttgacgttaagaagcttaaagatgctggtctctgtacagttgagtctgttgct 165
Query: 172 tactctcctcggaaagagcttttgcaaatcaaaggaatcagtgatgctaaagttgataaa 231
||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||
Sbjct: 166 tactctcctcgaaaagagcttctgcaaattaaaggaatcagtgaagctaaagttgataaa 225
Query: 232 ataattgaagcagcgtcaaaactggtgcctctgggttttactagtgccagccaactccat 291
|| ||||||||||| || ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 226 atcattgaagcagcttccaaattggtgcctctgggttttactagtgcgagccaactccat 285
Query: 292 gctcagagattagagataattcagataacatctgggtcaagagaacttgacaagatattg 351
||||| || ||||||||||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 286 gctcaaaggttagagataatccagataacttctggatcaagagaacttgacaaaatattg 345
Query: 352 gaaggagggattgagacaggatctatcactgagatatatggtgagtttcgctctggcaag 411
|||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 346 gaaggaggcattgagacaggatctattactgagatctatggtgagtttcgctctggcaag 405
Query: 412 actcaactgtgccacactctctgtgtcacctgtcaacttccattagatcaagggggtggt 471
|||||||||||||| || ||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 406 actcaactgtgccatacactctgtgtcacttgccaacttccattagatcaaggaggtggt 465
Query: 472 gagggaaaagcaatgtatattgatgctgagggcacgttcagaccacagagactcttacag 531
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 466 gagggaaaagcaatgtacattgatgctgagggcacattcaggccacagagactattacaa 525
Query: 532 atagcagacaggtttggattaaatggtgctgatgttttggagaatgtggcctatgctcgt 591
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atagcagacaggtttgggctgaatggtgctgatgttttggagaatgtggcctatgctcgt 585
Query: 592 gcatataacactgatcatcaatcaaggcttttgcttgaagcagcttctatgatg 645
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 586 gcttataacactgatcatcaatctaggcttttgcttgaagcagcttctatgatg 639
Score = 303 bits (153), Expect = 1e-81
Identities = 222/245 (90%)
Strand = Plus / Plus
Query: 744 gtttggggtagctgttgtaatcacaaaccaagtagttgcacaagtagatggttctgctat 803
|||||| || |||||||| || ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 639 gtttggtgttgctgttgtgataacaaatcaagttgttgcacaagtagatggttctgctat 698
Query: 804 ttttgcggggcctcaaatcaagcctattggtggtaatattatggctcatgcttccactac 863
|||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 699 ttttgctgggcctcagatcaagcctattggtggtaatataatggctcatgcttccacaac 758
Query: 864 aaggcttgctcttaggaagggaagaggagaggagcgcatctgtaaagtgataagttctcc 923
|||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 759 aaggcttgctctcaggaagggtagaggagaggagcgcatctgtaaagtaataagttctcc 818
Query: 924 atgtttagctgaagctgaagcgcgatttcagatttctgctgaaggggtaactgatgttaa 983
|||||||| ||||| |||||||| ||||| || || |||||||| |||||||||| ||
Sbjct: 819 ttgtttagccgaagccgaagcgcggtttcaaatctcagctgaaggcgtaactgatgccaa 878
Query: 984 ggact 988
|||||
Sbjct: 879 ggact 883