Jatropha Genome Database
- JcCA0317991.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317991.10 - phase: 0 /pseudo/partial
(894 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003712 conserved hypothetical protein 517 e-146
>29739.m003712 conserved hypothetical protein
Length = 888
Score = 517 bits (261), Expect = e-146
Identities = 628/750 (83%), Gaps = 9/750 (1%)
Strand = Plus / Plus
Query: 16 gaagttgtggaaattgatagcttagaaaagggtttattatcagaatcccgcggtggtggt 75
||||||| ||||||||||| |||||||| |||||||||||||||||| | |||||| |
Sbjct: 16 gaagttgcggaaattgataacttagaaaggggtttattatcagaatcatgtggtggtaat 75
Query: 76 tctcgggaagaaagtgaag---ctgatgacgaagcagttctctatacggcctcgttcgaa 132
||| |||| |||| ||||||| || | || || |||||||| |||||| |
Sbjct: 76 ------gaaaaaagcgaaggaactgatgatgacactgtgctgtatacggcgtcgttccga 129
Query: 133 gaaatggaagagaaatttatcaaataccaaacagcacagtgggttatgtactctttgctg 192
|||||||||||||||||| |||| || |||||||| || |||||||| |||||||||||
Sbjct: 130 gaaatggaagagaaatttgtcaagtatcaaacagctcaatgggttatctactctttgctt 189
Query: 193 ttaatattggcttgggggattgggttgttcatgcttctgtatctaccagttcgaagatat 252
||||||| |||||||| || |||||||| |||||||| ||| | ||||| | ||||||
Sbjct: 190 ctaatattagcttggggaatggggttgtttatgcttctctatttgccagtcaggagatat 249
Query: 253 atcttacgaaaagatattcaatccagaaagctctatcttacacctaatgccattgtctac 312
|| ||| | |||||||||||||| || ||||||| ||| || |||||||||||||| |||
Sbjct: 250 attttaaggaaagatattcaatcgaggaagctctttctcactcctaatgccattgtttac 309
Query: 313 aaagttacaaaaccagtagcatttccatgttttggagtgctaaagaaagagaagcatatt 372
|||||||| |||||||| ||||||||||||||||| ||| || | |||||||||||| ||
Sbjct: 310 aaagttacgaaaccagttgcatttccatgttttggggtgttacataaagagaagcatgtt 369
Query: 373 ttattaccttctgttgcagatatcgtaattgagcaaggatatttgcagtctctatttggt 432
|| |||||||| ||||| || ||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 370 ttgttaccttcagttgctgacatcataattgaacaaggatatttgcagtctctttttggt 429
Query: 433 gtatgctctctgagaattgagaatgttggtgtaagaaggccaccaagtgatgatgttcaa 492
|| | |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 430 gtctactctgtgagaattgagaatgctggtgtaagaaggccacctagtgatgatgttcaa 489
Query: 493 attcaaggggttgcaaatccaaatgctttcaagaaggctgtcttgacacggctatcatac 552
||||||||| |||||||||||| |||||||||||||| |||||||||| | ||||| |
Sbjct: 490 attcaagggattgcaaatccaagagctttcaagaaggcggtcttgacacagttatcacat 549
Query: 553 atgagaaatgagtttggttctagacaagtttctgcaattgaagacattcctagtttgagg 612
|| | || |||| ||| ||||||||||| || |||||||||||||||| |||||||||
Sbjct: 550 attaaaagtgagattgtatctagacaagtctccacaattgaagacattcccagtttgagg 609
Query: 613 ataggtcattcatcatccccttggatgtcgccatcaaagtctcttaggcatgatttgctt 672
|||| ||||| || || ||||||||||| ||| || ||| ||||||||||| ||
Sbjct: 610 ctaggccattcttcgtctccttggatgtccccaatgaaacctcagaggcatgatttaatt 669
Query: 673 cctaattcaggtgacatattgctactacagaaactggaggaagttggaagttctatgaag 732
||| |||||| ||| | | |||||||| ||||| ||||||||||||| ||| |||||
Sbjct: 670 cctggttcaggggacctggtactactacaaaaactagaggaagttggaaactctgtgaag 729
Query: 733 agagttcaaagtttaattgaggagcaacac 762
|| ||||||| ||||||||||||| |||||
Sbjct: 730 agggttcaaactttaattgaggagaaacac 759