Jatropha Genome Database
- JcCA0317901.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317901.20 + phase: 0
(2658 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29854.m001132 Ubiquitin carboxyl-terminal hydrolase, putative 1758 0.0
29333.m001070 Ubiquitin carboxyl-terminal hydrolase, putative 107 3e-22
30068.m002596 Ubiquitin carboxyl-terminal hydrolase, putative 74 5e-12
29333.m001069 conserved hypothetical protein 72 2e-11
28515.m000319 Ubiquitin carboxyl-terminal hydrolase, putative 56 1e-06
>29854.m001132 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2670
Score = 1758 bits (887), Expect = 0.0
Identities = 1575/1803 (87%), Gaps = 6/1803 (0%)
Strand = Plus / Plus
Query: 56 acaatgaccaacgcctctatttcgtaccttacaggtggtggaaagatgcacaagattcaa 115
|||||||||| || |||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 65 acaatgaccagcgactctattttgttccttacaggtggtggaaggatgcgcaagattcaa 124
Query: 116 cgtcattgggtgaatctgatgggaataaggggattttgtatataggaacttcaggatctt 175
| || | |||||||||||||||| | ||| | | ||||| || |||||||| ||||
Sbjct: 125 caatatcgagtgaatctgatgggaagagaggggtcctctatatggggacttcaggttctt 184
Query: 176 cctatgcgggtccaatgaagctcatcaacaacattttcagctcggatcttgtacttaatt 235
| ||||| ||||| |||||||| |||||||||||||| | ||||||||||||| | ||||
Sbjct: 185 cttatgcaggtcctatgaagcttatcaacaacatttttaactcggatcttgtattgaatt 244
Query: 236 tgaggagaggagaggaagcttcgcagaatggtgaaaatggtgaagtgggtgtctcaggac 295
||||||||| ||||||| ||| |||||||||||| ||||||||||| ||||| || || |
Sbjct: 245 tgaggagagaagaggaatctttgcagaatggtgagaatggtgaagttggtgtttctgggc 304
Query: 296 gagactttgcgttggtctcggcagaaatgtggttgaaggcactcaaatggcacagtgatt 355
|||||| ||| |||||||| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 305 gagactatgcattggtctccggagaaatgtggttgaaggcactcaaatggcatagtgatg 364
Query: 356 caaaagttgcatccaagtatggaaaaaccttttctgctgcagaagatgatatgtcagacg 415
| |||||||||||||||| | | ||||| ||||||||||||||||||||||||||||| |
Sbjct: 365 ctaaagttgcatccaagtctagcaaaacattttctgctgcagaagatgatatgtcagatg 424
Query: 416 tttatcctttacaaatgaggctctctgtgcagcgggaactgaattccttaggtgtaaaaa 475
| ||||| | ||| ||||||| |||||| ||||||| |||||||||||||||| ||||
Sbjct: 425 tctatcccctgcaattgaggctttctgtgttgcgggaagtgaattccttaggtgttaaaa 484
Query: 476 ttaccaaaaaggataattcaactgagcttttcagaagagcctgcaagatttttactgctg 535
||| ||| ||||| ||| |||||||||||||||||||||||||||||||||| | || ||
Sbjct: 485 ttagcaagaaggaaaatgcaactgagcttttcagaagagcctgcaagattttcagtgttg 544
Query: 536 attctgaggcgctgcgcatctgggacttttctggtcaaactacccaattttttgtaaatg 595
|||||||| ||| ||||| ||||||||||| || ||||| |||| |||||||||||||
Sbjct: 545 attctgagatgctacgcatatgggacttttcagggcaaacaacccttttttttgtaaatg 604
Query: 596 acaaca---agtctccgaaagactgtcagcgtcagtcagatcaggagattgttttggagt 652
|||| | | || || ||||| | |||||| || | |||||||||||| ||||||||||
Sbjct: 605 acaaaagtaaatcaccaaaagaatctcagcggcaattagatcaggagatcgttttggagt 664
Query: 653 tacaagtttatggactgtctgataacatgaaatgcagagaagggaaaaaggatgatgcca 712
|||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 665 tacaagtttatggattgtcggataacatgaaatgcagagatgggaaaaaggatgatgctg 724
Query: 713 ctgtacaatattctaatgggacacattcttccggaacttcaacaatgatgaatggtagtg 772
|| |||| ||| |||||| ||||||||||| ||||||||| | |||||||||||||
Sbjct: 725 ttgcacaaaattgtaatggaacacattcttctggaacttcac---ttatgaatggtagtg 781
Query: 773 ctggcagtattagcaccagtatttttcgtagtaattcttcatccttctttggaaagtctg 832
||| || |||||||||| |||| ||| || |||||||| |||| |||||||| ||||
Sbjct: 782 tcagcaatactagcaccagttttttccgttgtgattcttcagccttgtttggaaaatctg 841
Query: 833 gagaagctggctcattgggattgacaggattacagaatcttggaaatacttgcttcatga 892
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 842 gagaagctggctctttgggattgacaggactacagaatcttggaaatacttgctttatga 901
Query: 893 atagtgccattcagtgcctagcacacacaccaaagcttgtagactatttccttggtgatt 952
| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||
Sbjct: 902 acagtgccattcagtgcctagcacacacaccaaagcttgttgattattttcttggagatt 961
Query: 953 atggtagagaaataaatcatgacaacccattgggcatggatggtgagattgccttagcat 1012
|||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 962 atggcagggaaataaatcatgacaacccattgggcatggatggtgagattgcattagctt 1021
Query: 1013 ttggggatctattgaggaagttatgggctcccggagcatctccggtggcaccaaggacat 1072
||||||||||||||||||| ||||||||||| |||||| |||| |||||||| || || |
Sbjct: 1022 ttggggatctattgaggaaattatgggctcctggagcaactccagtggcacctagaacgt 1081
Query: 1073 tcaagtcaaagcttgctcgatttgctcctcagttcagtgggtttaatcaacatgattctc 1132
||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct: 1082 tcaagtcaaagcttgctcgatttgctcctcaattcagcggatttaatcaacatgattctc 1141
Query: 1133 aggaactccttgctttcttgttggatggacttcatgaggatctgaatcgtgtgaaatcca 1192
||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |
Sbjct: 1142 aggaactccttgccttcttgttggatggacttcatgaggatctcaatcgtgtaaaatcaa 1201
Query: 1193 agccttatgtagaagccaaagatggagagggcagaccagatgaagaagtagctgatgaat 1252
||||||||||||||||||| ||||||||||| ||| || |||||||| ||||||||||
Sbjct: 1202 agccttatgtagaagccaaggatggagagggtagattggacgaagaagttgctgatgaat 1261
Query: 1253 attggcggaatcatgtggctcgcaatgactctattattgttgatgtctgccagggtcaat 1312
|||||| |||||||||||||||||||||||| |||||||||||| ||||||| |||||||
Sbjct: 1262 attggcagaatcatgtggctcgcaatgactcaattattgttgatatctgccaaggtcaat 1321
Query: 1313 ataagtcaacattagtctgtccaatttgcaagaaggtatcggttacatttgatccattca 1372
|||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||
Sbjct: 1322 ataaatcaacattagtctgtcctatttgcaagaaggtgtcagttacatttgatccattca 1381
Query: 1373 tgtacttatcactacctctaccttcaacgaatacacggagtatgactttgacagttgtga 1432
||||||| || ||||||||||||||||| |||| ||||| ||||||||||||||||||||
Sbjct: 1382 tgtacttgtctctacctctaccttcaacaaatatacggactatgactttgacagttgtga 1441
Query: 1433 gtactgatggaagtagtcagccgtctccatataccatttctgtgccgaagtatggaaaat 1492
|||||||||||||||| ||||| ||| ||| |||||||||||| || |||||||||||||
Sbjct: 1442 gtactgatggaagtagccagccatcttcatttaccatttctgtacccaagtatggaaaat 1501
Query: 1493 gtgaagatcttactcgggctctaagccttgcatgctctttagggattgatgagaccttac 1552
||||||||||||| | |||| ||||| ||||| ||||| ||||||||||||| |
Sbjct: 1502 gtgaagatcttacccaggctttaagcaaagcatgttctttggggattgatgagatgctct 1561
Query: 1553 tggtggcagaggtgtacaataaccgcattatacgatatctagaagaaccggctgattctt 1612
||||||||||||| ||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 1562 tggtggcagaggtatacaataaccgcattatacgatatctagaggagccatctgattctt 1621
Query: 1613 tatcattgattagagatggtgaccgtctggttgcatatcggttgaataaagacttggaca 1672
||||||| |||||||||||||| ||||||||||| ||||| || || ||||| || ||||
Sbjct: 1622 tatcattaattagagatggtgatcgtctggttgcttatcgattaaagaaagaattagaca 1681
Query: 1673 atgtccctttggtaatatttatgcatcagcatatggatgagcaatacatcaatgggaaac 1732
|| | ||||| || |||||||||||||||||||||| ||||| || || |||| ||||
Sbjct: 1682 atattcctttagttgtatttatgcatcagcatatggaggagcagtatgtccatggaaaac 1741
Query: 1733 ttacttcaagttggaaggcatttggaattcctcttgtagcaccagtctgtaattttcaaa 1792
||||||||||||||||||||||| ||||||||||||| ||| ||| | | || |
Sbjct: 1742 aaacttcaagttggaaggcatttgggattcctcttgtaggaccggtccacagtcttgtca 1801
Query: 1793 atggatctgatatccgtaatttatatataaaattgcttactccatttcaaaaaccttctg 1852
|||||||||| |||| |||||| ||| |||| |||||| ||||||||| | |||| |||
Sbjct: 1802 atggatctgacatccataatttgtatctaaagctgcttagtccatttcatatacctgctg 1861
Query: 1853 atg 1855
|||
Sbjct: 1862 atg 1864
Score = 829 bits (418), Expect = 0.0
Identities = 610/674 (90%)
Strand = Plus / Plus
Query: 1985 attctgaagtacagttttatttgacagatgagaagggaacagttaaggactctgagatag 2044
|||||||| ||||||||||| | |||||||||||||||| |||| |||||| ||||||
Sbjct: 1997 attctgaactacagttttatataacagatgagaagggaatagttcaggacttgaagatag 2056
Query: 2045 taatgaatgaacaattaccagtggcgggaatgcccaaacgatttaatgttcttgtatgtt 2104
|| ||||| | ||||||| | ||| |||| ||||| |||||||||||||||||||
Sbjct: 2057 gtataaatgagcctgtaccagttacaggagtgccaaaacggtttaatgttcttgtatgtt 2116
Query: 2105 ggccagaaaaacatattgaacaatatgaaacacgccttcttaactcgttacctgagattt 2164
|| |||||||||| |||||||||||||| || ||| | |||| ||| ||||||||| |||
Sbjct: 2117 ggacagaaaaacaaattgaacaatatgatactcgcttgcttagctcattacctgaggttt 2176
Query: 2165 tcaagtctggctttcttgcaaagagacctcaggaatctgtttctctttacaagtgtcttg 2224
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2177 tcaagtctggctttcttgcaaagagacctcaggaatctgtttctctgtacaagtgtcttg 2236
Query: 2225 aagcatttttaaaggaagaacctcttggaccagatgacatgtggttctgtccaagttgca 2284
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2237 aagcatttttaaaggaagaacctcttggaccagatgacatgtggttctgtccaagctgca 2296
Query: 2285 agaaacatcggcaagccagtaaaaaattggacctttggaggctgccagaaattctggtta 2344
| || || || ||||||||||||||||| || |||||||| |||||||| ||||||||||
Sbjct: 2297 aaaagcaccgtcaagccagtaaaaaattagatctttggagactgccagagattctggtta 2356
Query: 2345 ttcatctaaaaagattctcttatacccgattcatgaagaacaagcttgaggcatatgttg 2404
||||| |||| || |||||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 2357 ttcatttaaagaggttctcttatacccgttttatgaagaacaagcttgaggcttatgttg 2416
Query: 2405 acttccctgttgatgatctagatttgtcaacttacatatcctacaaaaatggccagttat 2464
||||||||||||||||||| ||||||||| ||||||| |||||||| ||||| || ||||
Sbjct: 2417 acttccctgttgatgatcttgatttgtcagcttacatttcctacaagaatggtcaattat 2476
Query: 2465 ctcatcgttacatgctttatgctatcagtaatcactatggaagcatgggaggtggccatt 2524
||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2477 ctcatcgctatatgctttatgctatcagtaatcactatggaagcatgggaggtggtcatt 2536
Query: 2525 acactgcatttgtccatcatgggggtgaccggtggtatgactttgatgatagccaagttc 2584
|||| ||||||||||||||||||| || | |||||||||||||||||||||||| |||||
Sbjct: 2537 acacagcatttgtccatcatggggctggcaggtggtatgactttgatgatagcctagttc 2596
Query: 2585 atccaatcagccaggacaagataaagacttcagctgcttatgttcttttctacagaagag 2644
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 2597 atccaatcagccaggacaagataaagacttcggctgcttatgtgcttttctacagaagag 2656
Query: 2645 ttttagaagcttaa 2658
|| |||||| ||||
Sbjct: 2657 ttgtagaagtttaa 2670
>29333.m001070 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 1521
Score = 107 bits (54), Expect = 3e-22
Identities = 198/246 (80%)
Strand = Plus / Plus
Query: 1132 caggaactccttgctttcttgttggatggacttcatgaggatctgaatcgtgtgaaatcc 1191
|||||| | ||||| ||||||||||||||||| ||||| ||| | ||||||||||||| |
Sbjct: 4 caggaatttcttgccttcttgttggatggactccatgaagatttaaatcgtgtgaaatgc 63
Query: 1192 aagccttatgtagaagccaaagatggagagggcagaccagatgaagaagtagctgatgaa 1251
|||||||| |||||| |||||| ||| | | || || | ||||| || |||||
Sbjct: 64 aagccttacacagaagctaaagatacagatgaccatccggacaatgaagtggcagatgat 123
Query: 1252 tattggcggaatcatgtggctcgcaatgactctattattgttgatgtctgccagggtcaa 1311
||||||| ||||||| |||||||||||||||| ||||| |||||| | ||||| |||||
Sbjct: 124 tattggcagaatcatctggctcgcaatgactcgattatagttgatttatgccaaggtcag 183
Query: 1312 tataagtcaacattagtctgtccaatttgcaagaaggtatcggttacatttgatccattc 1371
||| |||||||| || || || || || |||||| || |||||||||||||||||
Sbjct: 184 tatcgttcaacattggtttgccccatgtgtaagaagaagtctgttacatttgatccattt 243
Query: 1372 atgtac 1377
||||||
Sbjct: 244 atgtac 249
Score = 73.8 bits (37), Expect = 5e-12
Identities = 274/353 (77%)
Strand = Plus / Plus
Query: 2194 caggaatctgtttctctttacaagtgtcttgaagcatttttaaaggaagaacctcttgga 2253
||||| ||||||||| | || || || || ||||||||||| |||||||| ||| | |||
Sbjct: 1063 caggagtctgtttctttgtataaatgcctagaagcatttttgaaggaagagcctttagga 1122
Query: 2254 ccagatgacatgtggttctgtccaagttgcaagaaacatcggcaagccagtaaaaaattg 2313
||||| ||||||||||| ||||| ||||| || ||||| || || ||||| || |||
Sbjct: 1123 ccagaagacatgtggttttgtcctgcctgcaaaaagcatcgacaggctagtaagaagttg 1182
Query: 2314 gacctttggaggctgccagaaattctggttattcatctaaaaagattctcttatacccga 2373
|| |||||||| |||| ||||| ||||| |||| |||| || |||||||| | |||
Sbjct: 1183 gatctttggagattgcctgaaatattggttgttcacttaaagaggttctcttacagtcga 1242
Query: 2374 ttcatgaagaacaagcttgaggcatatgttgacttccctgttgatgatctagatttgtca 2433
| || ||||||||||| || | ||||||| ||||| || || ||| | ||| | |||
Sbjct: 1243 gttattaagaacaagctggaaacccatgttgatttcccagtagaggattttgatctttca 1302
Query: 2434 acttacatatcctacaaaaatggccagttatctcatcgttacatgctttatgctatcagt 2493
|||||||| || ||| |||| ||||| || |||| || ||| ||||| || |||
Sbjct: 1303 acttacatttctcgcaaggatggtcagttttcctatcgatatgagctatatgcaataagt 1362
Query: 2494 aatcactatggaagcatgggaggtggccattacactgcatttgtccatcatgg 2546
||||| |||||| |||||||||| || || || ||||||||||| |||||||
Sbjct: 1363 aatcattatggaggcatgggaggcggacactatactgcatttgttgatcatgg 1415
>30068.m002596 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2817
Score = 73.8 bits (37), Expect = 5e-12
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 1092 atttgctcctcagttcagtgggtttaatcaacatgattctcaggaactccttgctttctt 1151
||||||||| ||||||||||| | |||||||||||||||||| ||||| ||||| || ||
Sbjct: 1212 atttgctccgcagttcagtggttataatcaacatgattctcaagaacttcttgcattttt 1271
Query: 1152 gttggatggacttcatgaggatctgaatcgtgt 1184
||||||| || ||||| ||| |||| |||||
Sbjct: 1272 actggatgggctgcatgaagatttgaaccgtgt 1304
>29333.m001069 conserved hypothetical protein
Length = 1080
Score = 71.9 bits (36), Expect = 2e-11
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 847 ttgggattgacaggattacagaatcttggaaatacttgcttcatgaatagtgccattcag 906
||||| ||| ||||||||| ||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 961 ttgggtttggcaggattacggaaccttgggaatacttgcttcatgaatagcgcaattcag 1020
Query: 907 tgcctagcacacacaccaaagcttgtagactatttc 942
|| | |||||||| ||||||| || || ||||||
Sbjct: 1021 tgtttggcacacactgcaaagctcgttgattatttc 1056
>28515.m000319 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2829
Score = 56.0 bits (28), Expect = 1e-06
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1081 aagcttgctcgatttgctcctcagttcagtgggtttaatcaacatgattctcagga 1136
||||| ||||| ||||| ||||| || ||||| | |||||||||||||||||||||
Sbjct: 1186 aagctggctcgttttgcacctcaatttagtggctataatcaacatgattctcagga 1241