Jatropha Genome Database
- JcCA0317741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317741.10 + phase: 1 /partial
(587 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013805 hmg-CoA reductase, putative 761 0.0
29682.m000571 hmg-CoA reductase, putative 268 3e-71
30162.m001288 hmg-CoA reductase, putative 202 2e-51
>30170.m013805 hmg-CoA reductase, putative
Length = 1731
Score = 761 bits (384), Expect = 0.0
Identities = 525/572 (91%)
Strand = Plus / Plus
Query: 3 aattattgttcggacaagaaacctgctgctgtaaactggattgaaggaaggggcaaatca 62
|||| ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||
Sbjct: 1144 aatttttgttcggacaagaaacctgccgctgtaaactggattgaaggacgtggcaaatca 1203
Query: 63 gttgtttgtgaggcaattatcaaggaagaggtggtgaaaaatgtattaaaaaccaatgtt 122
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 1204 gttgtttgtgaggcaattatcaaggaagaggtggtgaaaaaggtgttgaaaaccaatgtt 1263
Query: 123 gcttccctagtggagctcaacatgctaaaaaatcttgctggttctgctattgctggtgct 182
||||| || |||||||||||| |||| || |||||| ||||||||||| |||||||||||
Sbjct: 1264 gcttctctggtggagctcaacgtgctcaagaatcttactggttctgctgttgctggtgct 1323
Query: 183 ctgggtgggtttaatgctcatgcaggaaacattgtctctgcaatctttattgcaactggc 242
||||||| ||||| || ||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1324 ttgggtggatttaacgcccatgcagccaacattgtctctgcaatttttattgcaactggc 1383
Query: 243 caggatccagcacagaatattgagagttctcactgcattacgatgatggaagctgttaat 302
|||||||||||||||||| | ||||||||||||||||| || |||||||||||||| |||
Sbjct: 1384 caggatccagcacagaatgtcgagagttctcactgcatcaccatgatggaagctgtgaat 1443
Query: 303 gatggaaaggatctccatgtctcagtgtcaatgccttccattgaggtgggtacagttgga 362
|||||||||||||| || ||||| || | ||||||||||||||||||||||||||||||
Sbjct: 1444 gatggaaaggatcttcacgtctctgtcaccatgccttccattgaggtgggtacagttgga 1503
Query: 363 ggaggaactcaacttgcatctcagtctgcttgtctaaatttgcttggggtgaagggggca 422
|| ||||||||||| ||||||||||||||||| || ||||| ||||| |||||||| |||
Sbjct: 1504 ggtggaactcaactagcatctcagtctgcttgcctcaatttacttggtgtgaagggtgca 1563
Query: 423 agcaaagagtcaccaggatcaaactcaaggctccttgccaccatagtagctggttcagtt 482
|| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1564 agtaaagagtcaccagggtcaaactcgaggctccttgccaccatagtagctggttcagtt 1623
Query: 483 ttggccggtgagctgtctctgatgtctgccattgcagctgggcagcttgtcaacagccac 542
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 1624 ttggccggtgagctgtccctgatgtctgccattgcagctgggcagcttgtcaagagtcac 1683
Query: 543 atgaaatacaatagatccagcaaagatgtatc 574
||||| |||||||||||||||| |||||||||
Sbjct: 1684 atgaagtacaatagatccagcagagatgtatc 1715
>29682.m000571 hmg-CoA reductase, putative
Length = 1731
Score = 268 bits (135), Expect = 3e-71
Identities = 456/563 (80%)
Strand = Plus / Plus
Query: 9 tgttcggacaagaaacctgctgctgtaaactggattgaaggaaggggcaaatcagttgtt 68
|||||||||||||| | || |||||||||||||| |||||| | || ||||| || |||
Sbjct: 1150 tgttcggacaagaaggcagcagctgtaaactggatagaaggacgtggaaaatctgtagtt 1209
Query: 69 tgtgaggcaattatcaaggaagaggtggtgaaaaatgtattaaaaaccaatgttgcttcc 128
||||| || || | || ||||||||||| || || || | ||||||||||| ||| ||
Sbjct: 1210 tgtgaagccatcgtaaaagaagaggtggttaagaaggttctgaaaaccaatgtagctgcc 1269
Query: 129 ctagtggagctcaacatgctaaaaaatcttgctggttctgctattgctggtgctctgggt 188
|| |||||||| || |||| ||||| || |||| || || | || |||||||| |||
Sbjct: 1270 ctggtggagcttaatgtgcttaaaaacctcactggctcagccgtggcaggtgctcttggt 1329
Query: 189 gggtttaatgctcatgcaggaaacattgtctctgcaatctttattgcaactggccaggat 248
||||| ||||| ||||| | || ||||| ||||| ||| | || ||||| ||||||
Sbjct: 1330 gggttcaatgcccatgctagcaatattgtaactgcagtctacttggccactggacaggat 1389
Query: 249 ccagcacagaatattgagagttctcactgcattacgatgatggaagctgttaatgatgga 308
|| || || ||| | |||||||||||||| || || |||||||||||||||||||||||
Sbjct: 1390 cctgctcaaaatgtagagagttctcactgtatcaccatgatggaagctgttaatgatggc 1449
Query: 309 aaggatctccatgtctcagtgtcaatgccttccattgaggtgggtacagttggaggagga 368
||||| || || ||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 1450 aaggaccttcacatctcagtcacgatgccttccattgaggtgggtacagttggaggtggc 1509
Query: 369 actcaacttgcatctcagtctgcttgtctaaatttgcttggggtgaagggggcaagcaaa 428
|||||||| |||||||| || ||||| || ||| | ||||| |||| ||| || ||||||
Sbjct: 1510 actcaactggcatctcaatcagcttgcctgaatctacttggagtgaggggtgctagcaaa 1569
Query: 429 gagtcaccaggatcaaactcaaggctccttgccaccatagtagctggttcagttttggcc 488
|| || |||||||||||||||||||| || || ||||| || |||||||| || ||||
Sbjct: 1570 gattctccaggatcaaactcaaggcttctggctaccattgtggctggttctgtcctggca 1629
Query: 489 ggtgagctgtctctgatgtctgccattgcagctgggcagcttgtcaacagccacatgaaa 548
|| |||||||| || ||||| || |||||||||| || ||||| | ||||||||||||
Sbjct: 1630 ggggagctgtcccttatgtcggctcttgcagctggacaacttgttaggagccacatgaaa 1689
Query: 549 tacaatagatccagcaaagatgt 571
||||| ||||| |||||||||||
Sbjct: 1690 tacaacagatctagcaaagatgt 1712
>30162.m001288 hmg-CoA reductase, putative
Length = 1761
Score = 202 bits (102), Expect = 2e-51
Identities = 345/426 (80%)
Strand = Plus / Plus
Query: 132 gtggagctcaacatgctaaaaaatcttgctggttctgctattgctggtgctctgggtggg 191
|||||||| |||||||| || || || |||||||||| || || || ||||| ||||||
Sbjct: 1297 gtggagcttaacatgctcaagaacctcactggttctgccatggcaggagctctaggtggg 1356
Query: 192 tttaatgctcatgcaggaaacattgtctctgcaatctttattgcaactggccaggatcca 251
|| ||||||||||| | || |||||| |||| ||| || || |||||||| |||||
Sbjct: 1357 ttcaatgctcatgccagtaatattgtcactgctgtctacatagccactggccaagatcct 1416
Query: 252 gcacagaatattgagagttctcactgcattacgatgatggaagctgttaatgatggaaag 311
||||| ||| |||||||||||||||| || || ||||||||||||||||||||||| ||
Sbjct: 1417 gcacaaaatgttgagagttctcactgtatcactatgatggaagctgttaatgatgggcag 1476
Query: 312 gatctccatgtctcagtgtcaatgccttccattgaggtgggtacagttggaggaggaact 371
||||| |||||||| || | |||||||| |||||||| ||||| ||||||||||| ||
Sbjct: 1477 gatcttcatgtctctgtcactatgccttctattgaggttggtactgttggaggaggtaca 1536
Query: 372 caacttgcatctcagtctgcttgtctaaatttgcttggggtgaagggggcaagcaaagag 431
|| ||||| || ||||| || || | || |||||||||||||||| || |||||||||
Sbjct: 1537 cagcttgcctcacagtcagcatgcttgaacctgcttggggtgaagggtgccagcaaagag 1596
Query: 432 tcaccaggatcaaactcaaggctccttgccaccatagtagctggttcagttttggccggt 491
|||||||| | ||||||||||| || ||| | || || ||||| || || | || ||
Sbjct: 1597 acaccaggagctaactcaaggcttctggcctctattgttgctggctctgtccttgctgga 1656
Query: 492 gagctgtctctgatgtctgccattgcagctgggcagcttgtcaacagccacatgaaatac 551
||||| ||||| ||| | || |||| ||||| |||||||||| ||||||||||| |||
Sbjct: 1657 gagctctctctaatggccgcacttgccgctggacagcttgtcagaagccacatgaagtac 1716
Query: 552 aataga 557
||||||
Sbjct: 1717 aataga 1722