Jatropha Genome Database

JcCA0317621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0317621.10 + phase: 0 
         (870 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013929 conserved hypothetical protein                          198   4e-50

>30147.m013929 conserved hypothetical protein
          Length = 666

 Score =  198 bits (100), Expect = 4e-50
 Identities = 326/400 (81%), Gaps = 1/400 (0%)
 Strand = Plus / Plus

                                                                       
Query: 409 ttccccggaaagcacttgccttgtcggaacgtttcagggatgggatgtgaggagtattat 468
           ||||| || |||||||||||| |||| ||||||||||| ||||| || |||||||| |||
Sbjct: 164 ttcccggggaagcacttgcct-gtcgaaacgtttcaggaatgggttgcgaggagtactat 222

                                                                       
Query: 469 gggtgcccagcgtggagcgtagtgggccggcggcatgctgggtcaatgtttgggtccggc 528
           ||||||||||| |||||  | || || |   ||| ||  || || |  ||||||||||||
Sbjct: 223 gggtgcccagcctggagtctcgtagggcacaggcgtgtgggctcgacatttgggtccggc 282

                                                                       
Query: 529 ccaccggagtgttgtgctgtggcatttgaggctattaaggcaatcaatttaagcaagcta 588
           || ||||||||||| || |||||||||||||| ||||| ||||| ||| | || ||||| 
Sbjct: 283 ccgccggagtgttgcgcagtggcatttgaggcaattaaagcaataaatctgagtaagctt 342

                                                                       
Query: 589 gagtgtgaagggtatagcagtgcttacagtcttgcaccgctaagggttgatgggcctagt 648
           || |||||||| ||||||||||| || |||||||||||  |||| ||||| || ||  ||
Sbjct: 343 gaatgtgaaggatatagcagtgcgtatagtcttgcaccattaagagttgacggcccaggt 402

                                                                       
Query: 649 gaatggtcatttgggataagagtgaagtattcagtgcaagagaatgaggaattttgtaga 708
           |||||||| |  |||||| | ||||| ||||| || ||||  ||||||||||| ||||||
Sbjct: 403 gaatggtcttacgggatacgtgtgaaatattctgttcaaggaaatgaggaattctgtaga 462

                                                                       
Query: 709 gcttgtgaggcaactggtggcacttgtgggtatggctctgatgggattagacagatgtgc 768
           || || |||||||||||||| ||||| ||||| ||  |||||||| |||  ||| |||||
Sbjct: 463 gcatgcgaggcaactggtggaacttgcgggtacggtactgatggggttaagcagctgtgc 522

                                                   
Query: 769 atgtgtgcagatttcaactccacgtcaaattgtgattcag 808
           |||||||   ||||||| ||||| ||||| ||||| ||||
Sbjct: 523 atgtgtgggaatttcaattccacatcaaactgtgactcag 562