Jatropha Genome Database
- JcCA0317481.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317481.10 + phase: 0
(924 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29640.m000407 zinc finger protein, putative 722 0.0
29620.m000549 zinc finger protein, putative 86 4e-16
29620.m000550 zinc finger protein, putative 72 7e-12
>29640.m000407 zinc finger protein, putative
Length = 1734
Score = 722 bits (364), Expect = 0.0
Identities = 733/856 (85%)
Strand = Plus / Plus
Query: 8 ctacagtactaaagagtaattttgctccttatggtcgggatttcaatggtagcaagccca 67
||||||||||||| || |||||||| |||||||||||||||||||||||| |||| ||||
Sbjct: 134 ctacagtactaaaaagcaattttgcaccttatggtcgggatttcaatggtggcaaaccca 193
Query: 68 ctggtaggttttcaaacggtcggctcgcgacagacttcatttcagaagccttcggacaca 127
|||| ||||| || || |||||| | | |||||||||||||| ||||| ||||| | ||
Sbjct: 194 ctggaaggttctccaatggtcggattccaacagacttcatttctgaagctttcgggctca 253
Query: 128 agccaataatacctgcatatttggacccaacatatggcataaaagatttcgccactggcg 187
|||||| ||||||||||| |||| || || |||| |||| ||||||| ||| || |
Sbjct: 254 agccaacggtacctgcatatctggatccgacgtatgacatacaagattttgccgtgggag 313
Query: 188 tttgttttgcctctgcaggaactggttatgataatgctacatctgatgtgctatctgtaa 247
|||| || || ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 314 tttgcttcgcttctgcaggaactggttatgataatgctacttcagatgtgctatctgtaa 373
Query: 248 tacctctttggaaggaattggagtactataaagaatatcagaacaagcttagaggatatc 307
|||||||||||||||| |||||||||||||||||||| ||||| || ||||| || ||||
Sbjct: 374 tacctctttggaaggagttggagtactataaagaataccagaagaaacttagtggctatc 433
Query: 308 taggacatgagaaggctaatgaacttctaacggaagcactctacctaataagcataggaa 367
|||||||||| || |||||||| | ||||| ||||||||||||||| || ||||| ||||
Sbjct: 434 taggacatgaaaaagctaatgagcatctaagggaagcactctacctgatgagcatcggaa 493
Query: 368 caaatgacttcctagagaactattatttacttccaaaaagatcaaaacagttttcggtca 427
|||||||||| ||||| || || || | |||||| ||||||| | ||||||| || |
Sbjct: 494 caaatgactttctagaaaattactacatccttccaggaagatcatcagagttttctgtga 553
Query: 428 cggagtaccaaaattttcttgtgggaatcgctagagattttctcacagagctttatgatc 487
||||||||| ||||||||||| ||||| |||||||||||| ||||||||||| || ||
Sbjct: 554 gggagtaccagaattttcttgtaggaattgctagagattttatcacagagcttcatcttc 613
Query: 488 taggagctcggaagatatctatagctggccttcctccaatggggtgtttgcctttagaga 547
|||||||| | |||||||| || ||| ||||||||||||||||| |||||||| || |
Sbjct: 614 taggagctagaaagatatcagtaagtgggcttcctccaatggggtgcttgcctttggaaa 673
Query: 548 gaaccaccaatatacttcatggaagtgattgcattgaagaatacaataatgtggctaagg 607
|||| || |||||| || ||||||| | ||||||||||||||||| |||||||| ||||
Sbjct: 674 gaacaacaaatatattttttggaagtcagtgcattgaagaatacaacaatgtggccaagg 733
Query: 608 atttcaatgagaggctaaatgggatggtcactgagctgaagaggaagcttcatgggatca 667
|||||||||||| | | ||||| ||| ||| ||||||||| | ||| ||| |||||||||
Sbjct: 734 atttcaatgagaagttgaatggcatgctcattgagctgaataagaatcttgatgggatca 793
Query: 668 aacttgtgcttccgaacctctatgacattggctcaaaaataattcagaatccaggttctt 727
|||| |||||| | |||| ||||| ||| |||||| || ||| |||||||| ||||||
Sbjct: 794 aactggtgctttcaaacccttatgatattctctcaaagattattgagaatccaagttctt 853
Query: 728 ttgggtttgaaaatgcagcaaaagcatgctgtggaactggattttttgagatgggttaca 787
||||||| || ||||||||| |||||||||||||||||||| | ||||||||||||||||
Sbjct: 854 ttgggttcgataatgcagcagaagcatgctgtggaactggactatttgagatgggttaca 913
Query: 788 tgtgcaatggaagaaacccttttacatgctcagatgcaaataaatatgtattttgggatg 847
|||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 914 tgtgcaataaaagaaaccccttcacatgctcagatgcaaataaatatgtattttgggatt 973
Query: 848 ccttccaccctacaga 863
||||||||||||||||
Sbjct: 974 ccttccaccctacaga 989
>29620.m000549 zinc finger protein, putative
Length = 1059
Score = 85.7 bits (43), Expect = 4e-16
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 171 agatttcgccactggcgtttgttttgcctctgcaggaactggttatgataatgctacatc 230
|||||| || ||||| ||||| ||||||||||| |||||||| |||||||||||||| ||
Sbjct: 306 agattttgctactggtgtttgctttgcctctgctggaactggctatgataatgctacttc 365
Query: 231 tgatgtgctatctgtaatacctctttggaaggaattggagtactataaagaatatcagaa 290
| | || || || |||||||| ||||||||||| |||||||| ||||| || || ||
Sbjct: 366 taaagttttaaacgtgatacctctgtggaaggaattagagtactacaaagattaccaaaa 425
Query: 291 caagcttagag 301
|||||| ||||
Sbjct: 426 caagctgagag 436
Score = 60.0 bits (30), Expect = 2e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 808 tttacatgctcagatgcaaataaatatgtattttgggatgccttccaccctacagaaa 865
||||||||| ||||||| ||| ||||||||| |||||||||||||| ||||| ||||
Sbjct: 943 tttacatgcccagatgccaatcgatatgtattctgggatgccttccatcctactgaaa 1000
>29620.m000550 zinc finger protein, putative
Length = 1062
Score = 71.9 bits (36), Expect = 7e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 350 acctaataagcataggaacaaatgacttcctagagaacta 389
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 485 acctaataagcataggaacaaacgacttcctagagaacta 524
Score = 63.9 bits (32), Expect = 2e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 192 ttttgcctctgcaggaactggttatgataatgctacatctgatgtgctatctgtaatacc 251
|||||| ||||| | |||||| ||||||||||| || ||||||||||||||||| |||||
Sbjct: 327 ttttgcttctgctgcaactggctatgataatgccacttctgatgtgctatctgtgatacc 386