Jatropha Genome Database
- JcCA0317221.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317221.10 - phase: 0 /partial
(1517 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29843.m000287 Arginine decarboxylase, putative 646 0.0
>29843.m000287 Arginine decarboxylase, putative
Length = 1629
Score = 646 bits (326), Expect = 0.0
Identities = 1029/1262 (81%), Gaps = 6/1262 (0%)
Strand = Plus / Plus
Query: 241 ccattggttactgcactgaaagctttagccgcacaaaatgcagccacttttcacttccct 300
|||||||||| |||| |||| || | ||| |||||||||||||||| |||||||||||||
Sbjct: 160 ccattggttagtgcattgaaggcatcagctgcacaaaatgcagccagttttcacttccct 219
Query: 301 ggccataatagagggcaagctgcaccagtttcattaacacagctcattggtttaaaacca 360
|| |||||||||||| | ||||||||| ||| ||||| ||||| ||||| || ||||||
Sbjct: 220 ggacataatagagggtatgctgcaccaacttcgttaacgcagcttattggattgaaacca 279
Query: 361 tttattcatgatttgactgggcttcaagtgcttgacaagcttttttcacctgaaggacct 420
|||||||| || || ||| ||||| | ||| ||||| ||||| |||||||| ||| |
Sbjct: 280 tttattcacgacttacctgagcttccggagctcgacaaccttttctcacctgagggatcc 339
Query: 421 attgtggaggcacaaaagcaagctgccaaattgtttgggtcgctagaaacatggttcctc 480
|| | ||||| |||| || |||| | |||||||||||||||| ||||||||||||||
Sbjct: 340 atattagaggcgcaaatgctagcttctaaattgtttgggtcgcaggaaacatggttcctt 399
Query: 481 gttggaggtacaacgtctgggatccaagcagcaataatggcaacttgttctccgggagaa 540
||||||||||| || | |||||| ||||||||||||||| |||||||||| || ||||||
Sbjct: 400 gttggaggtactacatgtgggatacaagcagcaataatgacaacttgttcccctggagaa 459
Query: 541 catataattctccctcgcaattgccatgtatctgccatttctgctatggtattatcagga 600
||||| |||||||||||||||| ||| |||| ||||| || ||| | |||||||| |||
Sbjct: 460 catattattctccctcgcaattcccacttatcagccatatcagctttagtattatctgga 519
Query: 601 gcaatacccaaatacattataccggagtatgattctgaatgggacattgctggtgggatt 660
|| ||||| || ||||| ||||| |||||||||| | | ||||||||||| |||| |
Sbjct: 520 gctatacctaagtacatcatacctgagtatgattataattgggacattgcaggtgcagtc 579
Query: 661 actccattacaggtggaaaaagccattaaagagttggagatggaaggccataaacctgct 720
||||| | ||||||| | ||||| || ||||| || ||||||||||| || ||||| |||
Sbjct: 580 actccctcacaggtgaacaaagctatgaaagaattagagatggaaggtcagaaaccagct 639
Query: 721 gcagtttttgtcacttctccaacttacaatggcatatgcagcaatttaaatgagatttca 780
||||||||||||||||| || |||||| |||| ||||||||||| || | ||| ||||||
Sbjct: 640 gcagtttttgtcacttcccctacttaccatggtatatgcagcaacttgagtgaaatttca 699
Query: 781 cagctttgtcattgtcgaaaaattcctttaattgcagatgaggctcatggagctcacctg 840
||| | ||||||| ||| | ||||| |||||| ||||||||||||||||| ||| |
Sbjct: 700 caggtctgtcattctcgtggagttcctctaattgttgatgaggctcatggagcgcactta 759
Query: 841 ggatttcacccccaattgcccctttcggctctgaagcaaaatgctgatcttgtggtacaa 900
|||||||| ||||| |||| | ||| ||||| ||||| | |||||| | ||||| |||
Sbjct: 760 ggatttcatccccagatgcctcgttcagctctcaagcaggaagctgatttggtggtccaa 819
Query: 901 tcgactcacaaagttctatcctctctcacacagtcatcaatgttacacatgtcaggaaat 960
|| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 820 tctactcacaaagttctatgctctctcactcagtcatcaatgttacacatgtcaggaaaa 879
Query: 961 attgtggatagggagagaatttctcggtgtcttcaaactcttcaaactacaagccccagt 1020
|||||| ||||||| ||||||| ||||| ||||| || ||||||| ||||| || |||
Sbjct: 880 attgtgaatagggacagaatttgccggtgccttcagacccttcaaagcacaagtcctagt 939
Query: 1021 tctttacttttagcctcattagatgctgctagagctcaactcagtgaaaacccagaaact 1080
| | |||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||
Sbjct: 940 tatctacttttagcatcattagatgcagctagagctcaaattgatgagaacccagaaact 999
Query: 1081 attttccacgaaacaatgaagttagctattgaatctaaagaacttattaaaaagattcca 1140
||||| || || ||||| || | || |||||| | ||||| || ||||||| |||||||
Sbjct: 1000 atttttaacaaagcaatggagctggccattgaagcgaaagatctcattaaaaggattcca 1059
Query: 1141 ggtattacttggcttgagcttccaccaagcttctgtaaatttcctgcaaaggatccattg 1200
|||||||||| ||| ||| | ||||||| | | ||||| | || | ||||| |||
Sbjct: 1060 ggtattactttgctagag---cgaccaagccttgctgaattttcagccattgatcccttg 1116
Query: 1201 cgccttactgtcgggttctggcagcttggtttatccggttgtaaggcaggtgatatttta 1260
|||||||| | || || ||||||||||||||||| |||| | | |||| |||| ||||
Sbjct: 1117 cgccttaccattggtttttggcagcttggtttatctggttatgaagcagatgattattta 1176
Query: 1261 tacaggaatcatggaattgtacctgagcttgtagaaagtcgatctattacacttgcgatt 1320
|| ||||||||| | | ||| |||||||||| | || | ||||||||| |||| ||
Sbjct: 1177 tataggaatcatcaagtggtagctgagcttgttggaacccagtctattacatttgcattt 1236
Query: 1321 aatctaggaacttgtaaagagcatgttcagaggttagtgtcaggattagaagaattatct 1380
||||| |||||||||||||| |||||||||||| ||||||||||| | | |||||| |
Sbjct: 1237 aatcttggaacttgtaaagaacatgttcagaggctagtgtcaggactgaaggaattagca 1296
Query: 1381 gcaagttccttaaaaactgg---aacagaagaaaaggtgaagaatggagagaatataccg 1437
||| | |||||| | | ||| |||||||||| | ||||| | |||| || || |
Sbjct: 1297 gcatgctccttacagagtggtaccacagaagaaaggctgaaggaaggaggatatctatca 1356
Query: 1438 tttactgatattagcatgagcttgaatccgagagatgcattttttgctaagaaaaggaga 1497
||| ||||| |||||||||| ||||| || ||||||||||||||||| || |||||||||
Sbjct: 1357 tttgctgatgttagcatgagattgaacccaagagatgcattttttgcaaataaaaggaga 1416
Query: 1498 gt 1499
||
Sbjct: 1417 gt 1418