Jatropha Genome Database

JcCA0317211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0317211.10 + phase: 0 /partial
         (492 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29736.m002087 conserved hypothetical protein                          127   7e-29
29822.m003433 BRASSINOSTEROID INSENSITIVE 1-associated receptor ...    62   3e-09
30178.m000884 ATP binding protein, putative                            54   8e-07

>29736.m002087 conserved hypothetical protein
          Length = 1218

 Score =  127 bits (64), Expect = 7e-29
 Identities = 181/220 (82%)
 Strand = Plus / Plus

                                                                        
Query: 271  aaggatgccattgataaagctctaattgggaaaggtcatgatgatgagattatgcagttc 330
            ||||||||  ||||||||||| ||   |||||||||||| ||||||| ||||| |||  |
Sbjct: 994  aaggatgctgttgataaagctgtatgcgggaaaggtcataatgatgaaattatacagagc 1053

                                                                        
Query: 331  ctgaagattggctggagttgtgtggtttctaggccaaaggataggccttctatgttccaa 390
            |||||| |||  ||||| | | ||||||||||||| ||||||||||||||||||| ||||
Sbjct: 1054 ctgaaggttgcttggagctatatggtttctaggcccaaggataggccttctatgtcccaa 1113

                                                                        
Query: 391  gtctatgagtccttgaaggtcatggctgagaaacatggtttctctgaccagtacgaagaa 450
            || | | | ||  | |||| ||||||||||||||||||||| || || ||||| || |||
Sbjct: 1114 gtgtgtaactctgtaaagggcatggctgagaaacatggtttttccgaacagtatgatgaa 1173

                                                    
Query: 451  ttcccattgatctttgataaacaggattctgaatataaag 490
            |||| | ||||||| | |||||| ||| || |||||||||
Sbjct: 1174 ttcctaatgatcttcggtaaacaagatcctaaatataaag 1213



 Score =  119 bits (60), Expect = 2e-26
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                       
Query: 19  gcaagattggtcggttctcgtgattctaatgacagttcttttgtcaatggagatttaggg 78
           ||||| ||||| |||||||||||||| ||||| | ||| ||||| |||||||||||||||
Sbjct: 862 gcaaggttggttggttctcgtgattccaatgataattcctttgttaatggagatttaggg 921

                                                       
Query: 79  gaatttggttatgttgctcctgagtactcaagcactatggttgc 122
           || ||| ||||||||||||||||||||||||||| || ||||||
Sbjct: 922 gagtttagttatgttgctcctgagtactcaagcattacggttgc 965


>29822.m003433 BRASSINOSTEROID INSENSITIVE 1-associated receptor
            kinase 1 precursor, putative
          Length = 1809

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                        
Query: 40   gattctaatgacagttcttttgtcaatggagatttaggggaatttggttatgttgctcct 99
            ||||||||||| ||   || ||| ||||| || ||||| ||||| |||||||| || || 
Sbjct: 1363 gattctaatgagagcagttatgttaatggggacttaggtgaattaggttatgtagcgcca 1422

                                                   
Query: 100  gagtactcaagcactatggttgcctcactgaaaggagat 138
            |||||||| |||||||||||||| ||| | |||||||||
Sbjct: 1423 gagtactcgagcactatggttgcttcattaaaaggagat 1461


>30178.m000884 ATP binding protein, putative
          Length = 987

 Score = 54.0 bits (27), Expect = 8e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 58  tttgtcaatggagatttaggggaatttggttatgttgctcctgagta 104
           ||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 517 tttgtgaatggagaatttggggatttgggttatgttgctcctgagta 563