Jatropha Genome Database
- JcCA0317171.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317171.20 + phase: 0
(2271 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006479 Magnesium-chelatase subunit chlD, chloroplast prec... 2492 0.0
>30169.m006479 Magnesium-chelatase subunit chlD, chloroplast
precursor, putative
Length = 2283
Score = 2492 bits (1257), Expect = 0.0
Identities = 1841/2035 (90%), Gaps = 3/2035 (0%)
Strand = Plus / Plus
Query: 235 tcttcctatggcaggcagttctttcctttagctgctgttgttggccaggatgccatcaaa 294
||||||||||| ||||||| ||| |||||||| |||||||||||||||||||| || |||
Sbjct: 247 tcttcctatggaaggcagtacttccctttagccgctgttgttggccaggatgctataaaa 306
Query: 295 acggccctgttacttggtgccattgatcgtgagattggagggattgctatttctggaagg 354
|| || ||||| ||||| || |||||||||||||||||||| |||||||||||||||| |
Sbjct: 307 actgctctgttgcttggggctattgatcgtgagattggaggaattgctatttctggaaag 366
Query: 355 cggggaactgctaaaacagtgatggcacgtgggctgcatgcaattttgcctcctattgat 414
|| ||||| || || ||||| ||||||||||| ||||||| |||||||| || ||||||
Sbjct: 367 cgaggaacagccaagacagttatggcacgtggattgcatgccattttgccaccaattgat 426
Query: 415 gtagttgttggttcagtagcaaatgcagatccatcctatccagaagagtgggaagatggt 474
|| ||||||||||| |||| ||||| |||||||||| || |||||||||||||| ||
Sbjct: 427 gttgttgttggttctatagctaatgctgatccatcctgccctgaagagtgggaagacggc 486
Query: 475 ttagctgagagagc---atatgattctgatggtaatgttaagactcaagttgttagatct 531
||||| || ||| ||||||||||||||| ||| |||||||| |||||||||| |||
Sbjct: 487 ttagcagaacgagtggaatatgattctgatgggaatattaagactgaagttgttaggtct 546
Query: 532 ccttttgttcagattccactgggggtcacagaggatagactcattggatctgttgatgtt 591
||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 547 ccttttgttcagattcctttgggagtcacagaggatagacttattggttctgttgatgtt 606
Query: 592 gaggagtccgtgaaaacaggaactactgtcttccagccaggccttctagctgaagctcat 651
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 607 gaggagtctgtgaaaacaggaactactgtctttcagccaggccttctagctgaagctcat 666
Query: 652 agaggtgttttatatgttgatgaaattaatcttttggatgaaggtattagtaatttgctc 711
||||||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 667 agaggtgttctgtatgttgatgagattaatcttttggatgagggtattagtaatttgctt 726
Query: 712 cttaatgtattgacggaaggggttaatattgtggaaagagagggaattagctttaagcac 771
|||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||
Sbjct: 727 cttaatgttttgacggaaggggttaatattgtcgaaagagagggaatcagctttaggcat 786
Query: 772 ccatgcaagccacttttgattgctacttataacccagaagagggcgccgttcgagaacac 831
||||||||||||||| |||| |||||||| |||||||||||||| || ||||| ||||||
Sbjct: 787 ccatgcaagccacttctgatagctacttacaacccagaagagggtgctgttcgtgaacac 846
Query: 832 ttactagatcgtatagctattaatttgagtgcagatcttccaatgaattttgaagatcgt 891
||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 847 ttactggatcgtattgctattaatttgagcgcagatcttccaatgaattttgaagatcgt 906
Query: 892 gttgcagctgttggaattgctactcagtttcaggaacgcagtaatgaagtttttcaaatg 951
|| ||||||||||| ||||| || ||||||||||||| ||| |||||||||| |||||
Sbjct: 907 gtagcagctgttggtattgcgacacagtttcaggaacattgtactgaagtttttaaaatg 966
Query: 952 gttgtggaagagactgaatttgcaaagacccaggttattttggcaagagagtatttgaag 1011
|| | ||||||||| |||||||||||||||||| | |||||||| |||||||||||||||
Sbjct: 967 gtcgaggaagagacagaatttgcaaagacccagatcattttggctagagagtatttgaag 1026
Query: 1012 gatgttactattggcagggagcaattgaagtacctagttatggaagcccttcgaggtggt 1071
|||||||| || ||||||| ||||||||||| || ||| ||||||||||||||||||||
Sbjct: 1027 gatgttaccgttagcagggaccaattgaagtatcttgttttggaagcccttcgaggtggt 1086
Query: 1072 tgtcagggacatagagctgagctatatgctgcccgtgtggcaaaatgcttggctgctctt 1131
|| |||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1087 tgccagggacacagagcggagctatatgctgctcgtgttgcaaaatgcttggctgctctt 1146
Query: 1132 gaaggacgtgaaaaagtcaacgtggatgacctgaaaaaagctgtggaactggttattctt 1191
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 1147 gaaggacgtgaaaaagtcaatgtggatgacctgaaaaaagctgtggaattggttattctt 1206
Query: 1192 cctcgttctatcgtgagtgagaatccaccagaacagcaaaatcagcagcctccaccacca 1251
|||||||| ||| | | ||||| |||||||||||||||||| || ||||||||||| |||
Sbjct: 1207 cctcgttcaatcatcaatgagagtccaccagaacagcaaaaccaacagcctccacctcca 1266
Query: 1252 ccacccccacagaatcaggattctggggatcagcaggatgaggaggaagatcaggaggaa 1311
||||| ||||| ||||||||| |||||||| ||||| ||||||||||||| || |||||
Sbjct: 1267 ccacctccacaaaatcaggatcctggggatgagcagaatgaggaggaagaccaagaggac 1326
Query: 1312 aatgatgaagagaatgaacaacagcaggaacaaatacctgaagaatttatctttgatgcc 1371
||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1327 aatgatgaagataatgaacaacagcaggatcaaatacctgaagaatttatatttgatgca 1386
Query: 1372 gaaggaggcttagtggatgaaaaacttctcttcttcgcacaacaagcgcagagacgccga 1431
||||| ||||| || |||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct: 1387 gaagggggctttgtagatgaaaaacttctattctttgcacaacaagcgcagagacggcga 1446
Query: 1432 gggaaggctggaagagcaaaaaatgttatattttcagaggatagaggtcgatatattaaa 1491
|| |||||||| |||||||| || || |||||||||||||| |||||||| || ||||||
Sbjct: 1447 ggcaaggctgggagagcaaagaacgtcatattttcagaggacagaggtcgctacattaaa 1506
Query: 1492 ccaatgctcccaaagggtcctgtgaagagattagcagttgatgcaacccttagggcagct 1551
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 ccaatgctccctaagggtcctgtgaagagattagcagttgatgcaacccttagggcagct 1566
Query: 1552 gcaccatatcaaaagttacgtagagagaaggacactcaaaaaagtaggaaagtttttgtt 1611
|||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1567 gcaccatatcaaaaactgcgtagagagaaggacactcaaaagagtaggaaagtttttgtt 1626
Query: 1612 gagaaagctgacatgagggcaaaaagaatggcaagaaaagctggagcactggtaatattt 1671
|||||| |||| |||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 1627 gagaaaactgatatgagggcaaaaagaatggccagaaaagccggagcactggtgatattt 1686
Query: 1672 gtagttgatgcaagtggaagtatggcattgaatcgaatgcaaaatgcgaaaggtgctgca 1731
||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 1687 gtagtcgatgcaagtggaagtatggcgttgaaccgaatgcaaaatgcaaaaggtgctgca 1746
Query: 1732 ctcaagttactagctgagagttatacaagcagggatcaggttgctattattccattccgt 1791
| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 1747 attaagttactagctgagagttatacaagcagggatcaggttgctattatccccttccgc 1806
Query: 1792 ggagattccgctgaggtccttttacctccttccagatcaattgcaatggcaagaaaacgt 1851
|||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 ggagattctgctgaagttcttttacctccttccagatcaattgcaatggcaagaaaacgc 1866
Query: 1852 cttgaaagacttccatgtggtggtggttcacccttggctcatggtctaacgacagctgtt 1911
||||||||||||||||||||||||||||| ||||| ||||| || || || || ||||||
Sbjct: 1867 cttgaaagacttccatgtggtggtggttcgcccttagctcacggcctcacaactgctgtt 1926
Query: 1912 agggttgggctaaatgcagaaaagagtggtgatgttgggcgtataatgattgttgcaata 1971
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 1927 agggttgggttaaatgcagaaaagagtggtgatgtagggcgtataatgattgttgctata 1986
Query: 1972 actgacggcagagccaatatatctctaaaaaggtccagtgaccctgaagctgctgctcct 2031
|| || || |||||||| ||||| || |||||||||| ||| ||||| | ||||||| ||
Sbjct: 1987 acagatggtagagccaacatatcactgaaaaggtccactgatcctgacgttgctgcttct 2046
Query: 2032 gatgccccaaggccttcggcacaagaattgaaggatgagattcttgaagtggcgggtaaa 2091
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2047 gatgccccaagaccttcagcacaagaattgaaggatgagattcttgaagtggcggggaaa 2106
Query: 2092 atatacaaggcagggatgtctcttcttgtcattgacacagaaaacaagtttgtctcaact 2151
|||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 2107 atatacaaggcaggaatgtcccttcttgtcattgatacagaaaacaagtttgtctcaact 2166
Query: 2152 ggttttgctaaggagattgcaagagtggcccaaggaaaatattactacttgcccaatgct 2211
|| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 2167 ggatttgctaaagagattgcaagagtcgctcaaggaaaatattattacttgcccaatgct 2226
Query: 2212 tctgacgctgttatttctgctacaacgaaggaagctctatcagccttaaagagtt 2266
|| || ||||||||||||||||| || || |||||| ||||||||||||||||||
Sbjct: 2227 tcagatgctgttatttctgctacgactaaagaagctttatcagccttaaagagtt 2281