Jatropha Genome Database
- JcCA0317171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317171.10 + phase: 0 /pseudo/partial
(1725 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006480 hypothetical protein 281 7e-75
>30169.m006480 hypothetical protein
Length = 5748
Score = 281 bits (142), Expect = 7e-75
Identities = 265/306 (86%)
Strand = Plus / Plus
Query: 804 taagaaaccagcaaaagttacttcgtttcgcaagaagaggacagagaattatcatagtta 863
|||||||||| ||||||||||||| | ||||||||||||||| || |||||||| ||
Sbjct: 4821 taagaaaccaacaaaagttacttcatggcgcaagaagaggacacaggcttatcataattt 4880
Query: 864 ctggcttaatggtctatttttgtctagaaagccaggtgatgaacgggttatgcattttag 923
||||||||||||||| |||||| |||||||||||| ||||||||| || |||||||||||
Sbjct: 4881 ctggcttaatggtctttttttgactagaaagccagatgatgaacgtgtaatgcattttag 4940
Query: 924 gagtaaaaagtttcttgccccttctgagagtgtgagcctggatcaacacaaatgtcctct 983
||| |||| |||||||||||||||||||||| | | ||||||| |||||| | |||
Sbjct: 4941 gaggaaaagatttcttgccccttctgagagtgccattcatgatcaacccaaatgccatct 5000
Query: 984 ttgccatgaagctggatatacatctaccttgaattatatttcttgtgagatgtgtggaga 1043
|||| |||||| ||| ||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 5001 ttgctctgaagcaggaaatacatctaccttgagttatatttcttgtgagatctgtggaga 5060
Query: 1044 gtggtttcatggagatgcttttggacttaatgtggagaaaagcaataggctcattggatt 1103
||||| |||||||| |||||||||||| ||| ||||| ||||||| ||| ||||||||
Sbjct: 5061 gtggtatcatggagctgcttttggactggatgcagagaacagcaataagcttattggatt 5120
Query: 1104 taggtg 1109
||||||
Sbjct: 5121 taggtg 5126
Score = 280 bits (141), Expect = 3e-74
Identities = 405/488 (82%), Gaps = 5/488 (1%)
Strand = Plus / Plus
Query: 1 gttagagatcttgattcaaacatcaagtgggatgaaattgggaacataaatccgctgtca 60
|||||||| |||||||||||||||| |||||||||||||||||| | ||||||||||| |
Sbjct: 3937 gttagagagcttgattcaaacatcaggtgggatgaaattgggaatagaaatccgctgtta 3996
Query: 61 cttgtggacaaggaatccaa-aaatcaatcagactgttcaagaaagtaattgtccgcaga 119
| ||||||||||| | ||||||||||| | || |||||||||||| |||| ||
Sbjct: 3997 atgatggacaaggaaagtaggaaatcaatcaggttatttaagaaagtaattatccggagg 4056
Query: 120 aagtgtgcagaaggagaaggggcaaaatatcttcttgattttggcaagaggagaattat- 178
||| | ||| ||||||||||| ||||||||||||||||||||||||| | |||
Sbjct: 4057 aagagcatggaactggaaggggcaaagtatcttcttgattttggcaagaggaaatgtatt 4116
Query: 179 cctgaaatg--ttcaa-gaatggatctatggttgaagaatcctccagtgtgaggaagaaa 235
|||||||| ||||| |||||||||||| |||||||| || || || | |||||||||
Sbjct: 4117 cctgaaattgtttcaaagaatggatctatagttgaagagtcttctagcgaaaggaagaaa 4176
Query: 236 tattggttgaatgaatcttatgtccctctgtatctcttgaaaagttttgaagagaaacga 295
|||||||||||||| |||||||| || |||||||| | |||||||||||| ||||| ||
Sbjct: 4177 tattggttgaatgagtcttatgttcccttgtatctcctcaaaagttttgaacagaaaaga 4236
Query: 296 attgcccgcagatctagtaaggtgagttctgggaaactttctgatgctgttgcagtagtg 355
|||||||||||||||||||| ||| |||||||||||||||||| ||| || | | ||
Sbjct: 4237 attgcccgcagatctagtaaaatgacttctgggaaactttctgacgctagtgtatcaatg 4296
Query: 356 aagaagtcctcaaagagaagtgggttctcgtatctttttgcaaaagctgaaagatctgag 415
|||||| | | |||| ||| || || || |||||||||||||| || |||||| | |||
Sbjct: 4297 aagaagccgttgaagaaaagaggattttcatatctttttgcaaaggcagaaagacccgag 4356
Query: 416 taccatcagtgtgggcactgtaacaaagatgttccaataagggaggctatatgctgccag 475
| ||||||||||||||||| |||||||||||||| | ||||||||| ||||||| |||
Sbjct: 4357 catcatcagtgtgggcactgcaacaaagatgttcctgtcagggaggctgtatgctgtcag 4416
Query: 476 tattgcaa 483
||||||||
Sbjct: 4417 tattgcaa 4424
Score = 113 bits (57), Expect = 4e-24
Identities = 93/105 (88%)
Strand = Plus / Plus
Query: 624 taaaaacaataaaaaagtattgaggagctcacggtcattacgatcacaaaagaacaagaa 683
|||||||| ||||||| |||||| |||||| ||| |||| ||||||| || ||||||||
Sbjct: 4641 taaaaacagtaaaaaaacattgagaagctcaaggttattaagatcacagaaaaacaagaa 4700
Query: 684 agttactattgttgtacctctgcgtcgttcacccaggaaagctaa 728
|| |||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 4701 agctactgttgttgtacctctgcgtcgttcacctaggaaagctaa 4745
Score = 73.8 bits (37), Expect = 3e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1425 tgatgcaattcaaatttctaatgataatttgaatccagaatctatatcatgtaatgaaaa 1484
||||||| ||||||||||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 5427 tgatgcagttcaaatttctgatgaatatttgaatccagaactaatatcatgtaatgaaaa 5486
Query: 1485 tcata 1489
|||||
Sbjct: 5487 tcata 5491