Jatropha Genome Database
- JcCA0317161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0317161.10 + phase: 0
(1065 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30146.m003546 Auxin-responsive protein IAA27, putative 335 3e-91
30170.m013613 Auxin-responsive protein IAA19, putative 123 2e-27
29912.m005483 Auxin-responsive protein IAA27, putative 117 1e-25
29883.m001993 Auxin-induced protein AUX28, putative 78 1e-13
29841.m002748 Auxin-induced protein AUX22, putative 76 5e-13
29844.m003174 Auxin-responsive protein IAA7, putative 72 8e-12
29598.m000460 Auxin-responsive protein IAA16, putative 70 3e-11
28179.m000461 transcription factor, putative 58 1e-07
30008.m000799 Auxin-responsive protein IAA13, putative 52 7e-06
>30146.m003546 Auxin-responsive protein IAA27, putative
Length = 1122
Score = 335 bits (169), Expect = 3e-91
Identities = 282/319 (88%), Gaps = 3/319 (0%)
Strand = Plus / Plus
Query: 476 ttattgctcaatctccaaagccagttcaagggaagagcagtgaagtctc---tggtgcaa 532
|||||||||||||||||||||||||| | ||||| |||| ||||||| ||||||||
Sbjct: 563 ttattgctcaatctccaaagccagtttctgagaagaacagtcaagtctccagtggtgcaa 622
Query: 533 atgagaacagtaatgctcctgctgctaaggcacaggtggtggggtggccacctatccgtt 592
||||||| ||| |||||||||||| |||||||| ||||| |||||||||||||| || |
Sbjct: 623 atgagaatggtagtgctcctgctgcaaaggcacaagtggtagggtggccacctattcgat 682
Query: 593 cttttcgaaagaacacgatggtctctaatttggcaaagaacactgaagatgctgaaggca 652
| ||||| ||||| || |||| ||||||| |||||||||||| |||||||||||||||||
Sbjct: 683 catttcggaagaataccatggcctctaatgtggcaaagaacaatgaagatgctgaaggca 742
Query: 653 aatcaggatttgggtgcctctatgtaaaagttagcatggatggtgcaccataccttagga 712
||||||||| ||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 743 aatcaggatctgggtgcctctatgtgaaggttagcatggatggtgcaccatacctcagga 802
Query: 713 aggttgatctcaaaacctacagcaactatgtggaactctcatctgctcttgagaagatgt 772
||||||||||||| ||||||||||||||||| ||||||||||||| ||||| || ||||
Sbjct: 803 aggttgatctcaagacctacagcaactatgtagaactctcatctggacttgaaaaaatgt 862
Query: 773 tcagttgctttactattgg 791
| ||||| ||||| |||||
Sbjct: 863 ttagttgttttaccattgg 881
Score = 280 bits (141), Expect = 2e-74
Identities = 201/221 (90%)
Strand = Plus / Plus
Query: 845 ttccagggcgagatggcctgagcgagacttgtttaaaagatcttctccatggctctgaat 904
||||||| |||||||| ||||||||||| |||||||| |||||||| ||||| ||||| |
Sbjct: 902 ttccaggacgagatggtctgagcgagacctgtttaaaggatcttcttcatggttctgagt 961
Query: 905 atgttctcacatatgaagataaggacggtgactggatgcttgtcggcgatgtgccctggg 964
|||||||||||||||||||||||||| |||| ||||||||||| || ||||| |||||||
Sbjct: 962 atgttctcacatatgaagataaggacagtgattggatgcttgttggtgatgtcccctggg 1021
Query: 965 agatgtttacggacacatgcaggagattgaggatcatgaaaggttcagaggctattgggc 1024
|||||||||| || |||||||||||| | || |||||||||||||||||||| |||||||
Sbjct: 1022 agatgtttactgaaacatgcaggagactcagaatcatgaaaggttcagaggcaattgggc 1081
Query: 1025 ttgctccaagggccatggagaaatgtaagaatcgtaattag 1065
||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 1082 ttgctccaagggccatggagaaatgcaagagtcgtaattag 1122
Score = 123 bits (62), Expect = 2e-27
Identities = 134/158 (84%)
Strand = Plus / Plus
Query: 270 tagctcattaaagaatttggtctcaggggctaagagaggtttctcagatgccattgatag 329
|||| ||||||||| ||| || ||||| ||||| |||||||||||||||||||||||| |
Sbjct: 330 tagcccattaaagagtttagtttcaggtgctaaaagaggtttctcagatgccattgatgg 389
Query: 330 ctcctctggaaaatgggttttctctgtcaataatggatctgagactgatttgagtaaagg 389
|| || || ||||||||| |||| |||||||||||||| | |||||||||||||||
Sbjct: 390 ttctactactaattgggttttccctgttaataatggatctgacattgatttgagtaaagg 449
Query: 390 agctgtcttgttttctcctagaggtgataatggtaata 427
|||||||| || || | |||||||||||||||||||
Sbjct: 450 tgctgtcttattctcctcaagaggtgataatggtaata 487
Score = 117 bits (59), Expect = 1e-25
Identities = 216/270 (80%), Gaps = 30/270 (11%)
Strand = Plus / Plus
Query: 8 taccaaaagaacatgattacataggcttatcagagacttcttctcctatggaaagaatct 67
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 11 taccaaaagaacatgattacataggcttatcagaga---cttctcctatggaaagaatct 67
Query: 68 ctgataagctttc---------------atcctcttcttcttcttcctc-tactcta--t 109
|||| |||||||| ||||||||||||||||| || | |||||
Sbjct: 68 ctgacaagctttcctcttccccttccttttcctcttcttcttcttcttcttcctctacta 127
Query: 110 caactgaagagaacagcaacaaaaacaaaacttctctcaaccttaaagaaactgagctga 169
||| |||||||||||| ||||||||||| |||| ||| ||| | |||||||||||| | |
Sbjct: 128 caaatgaagagaacagtaacaaaaacaagacttgtcttaacttaaaagaaactgagttaa 187
Query: 170 ggcttggtttgcctgggtcacagtcccctgaaagaaaaccactg---------actgggg 220
|||||||||||||||| || || || || |||||||| || ||| |||||||
Sbjct: 188 ggcttggtttgcctggttctcaatctccagaaagaaagcccctgtctttgcatactgggg 247
Query: 221 tctctctttttggaaaagatattgaaacca 250
| ||||||||||||||||| ||||| ||||
Sbjct: 248 tttctctttttggaaaagacattgacacca 277
>30170.m013613 Auxin-responsive protein IAA19, putative
Length = 1125
Score = 123 bits (62), Expect = 2e-27
Identities = 107/122 (87%)
Strand = Plus / Plus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 942
||||| || |||||||| |||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 907 gatctacttcatggctcagaatatgttctcacttatgaagataaagatggtgactggatg 966
Query: 943 cttgtcggcgatgtgccctgggagatgtttacggacacatgcaggagattgaggatcatg 1002
||||| |||||||| || |||||||||||||| || ||||||| ||| |||| ||||||
Sbjct: 967 cttgttggcgatgttccatgggagatgtttactgatacatgcaagaggctgagaatcatg 1026
Query: 1003 aa 1004
||
Sbjct: 1027 aa 1028
Score = 58.0 bits (29), Expect = 1e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 744 ggaactctcatctgctcttgagaagatgttcagttgctttactat 788
|||||| || ||||| ||||||||||||||||| |||||||||||
Sbjct: 801 ggaactatcttctgcccttgagaagatgttcagctgctttactat 845
>29912.m005483 Auxin-responsive protein IAA27, putative
Length = 894
Score = 117 bits (59), Expect = 1e-25
Identities = 149/179 (83%)
Strand = Plus / Plus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 942
||||| || ||||| ||||||||||| ||||| |||||||| || || ||||| ||||||
Sbjct: 712 gatctcctgcatggttctgaatatgtactcacctatgaagacaaagatggtgattggatg 771
Query: 943 cttgtcggcgatgtgccctgggagatgtttacggacacatgcaggagattgaggatcatg 1002
||||| || ||||| || ||| ||||||| || ||||| || ||||| |||||||||||
Sbjct: 772 cttgttggtgatgttccatggaagatgttcaccgacacttgtaggaggctgaggatcatg 831
Query: 1003 aaaggttcagaggctattgggcttgctccaagggccatggagaaatgtaagaatcgtaa 1061
||| |||||||||| ||||| || || ||||| || |||||||| || || ||||||||
Sbjct: 832 aaaagttcagaggcaattggcctagccccaagagcaatggagaagtgcaaaaatcgtaa 890
Score = 81.8 bits (41), Expect = 8e-15
Identities = 89/105 (84%)
Strand = Plus / Plus
Query: 688 atggatggtgcaccataccttaggaaggttgatctcaaaacctacagcaactatgtggaa 747
|||||||| || || || || ||||| |||||||||||||||||||||| |||| |||||
Sbjct: 550 atggatggagctccttatctgaggaaagttgatctcaaaacctacagcagctatatggaa 609
Query: 748 ctctcatctgctcttgagaagatgttcagttgctttactattggt 792
|| || || | || || |||||||||||||||||||| ||||||
Sbjct: 610 ctttcttcaggactcgaaaagatgttcagttgctttacaattggt 654
>29883.m001993 Auxin-induced protein AUX28, putative
Length = 735
Score = 77.8 bits (39), Expect = 1e-13
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 882 agatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggat 941
|||||||||| |||| |||| ||||||| || |||||||||||||| |||||||||||
Sbjct: 552 agatcttctcaatggaactgactatgttccaacttatgaagataaggatggtgactggat 611
Query: 942 gcttgtcggcgatgtgccctgggagatgttt 972
|||||| || ||||| || ||| ||||||||
Sbjct: 612 gcttgttggggatgtcccgtggaagatgttt 642
>29841.m002748 Auxin-induced protein AUX22, putative
Length = 585
Score = 75.8 bits (38), Expect = 5e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 915 atatgaagataaggacggtgactggatgcttgtcggcgatgtgccctgggagatgtttac 974
|||||| || ||||| || |||||||||||||| || ||||| |||||||||||||||||
Sbjct: 420 atatgaggacaaggatggagactggatgcttgtgggagatgtcccctgggagatgtttac 479
Query: 975 ggacacatgcaggagattgaggatcatgaa 1004
|| |||||| |||| | |||||||||||
Sbjct: 480 agagtcatgcaagagactaaggatcatgaa 509
>29844.m003174 Auxin-responsive protein IAA7, putative
Length = 546
Score = 71.9 bits (36), Expect = 8e-12
Identities = 138/172 (80%)
Strand = Plus / Plus
Query: 883 gatcttctccatggctctgaatatgttctcacatatgaagataaggacggtgactggatg 942
||||||||| | ||||||| ||||| | || |||||||||||||| || |||||||||
Sbjct: 364 gatcttctcaacagctctgagtatgtgccaacctatgaagataaggatggagactggatg 423
Query: 943 cttgtcggcgatgtgccctgggagatgtttacggacacatgcaggagattgaggatcatg 1002
|| || |||||||| || |||||||||||| || |||||| | ||| | || |||
Sbjct: 424 ctcgtgggcgatgttccatgggagatgtttgttgattcatgcaaacgcttgcgaattatg 483
Query: 1003 aaaggttcagaggctattgggcttgctccaagggccatggagaaatgtaaga 1054
||||| || || |||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 484 aaaggatctgaagctattggacttgcaccaagagctatggagaaatgcaaga 535
>29598.m000460 Auxin-responsive protein IAA16, putative
Length = 774
Score = 69.9 bits (35), Expect = 3e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 893 atggctctgaatatgttctcacatatgaagataaggacggtgactggatgcttgtcggcg 952
|||| ||||||||||| | || |||||||||||||| || |||||||||||||| || |
Sbjct: 602 atggttctgaatatgtcccaacttatgaagataaggatggagactggatgcttgtaggag 661
Query: 953 atgtgccctgggagatgtt 971
||||||| ||||| |||||
Sbjct: 662 atgtgccatgggaaatgtt 680
>28179.m000461 transcription factor, putative
Length = 1149
Score = 58.0 bits (29), Expect = 1e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 913 acatatgaagataaggacggtgactggatgcttgtcggcgatgtgccctgggagatgttt 972
|||||||| || || || ||||||||||||||||| || ||||| || ||||||||||||
Sbjct: 997 acatatgaggacaaagatggtgactggatgcttgttggggatgtaccatgggagatgttt 1056
Query: 973 a 973
|
Sbjct: 1057 a 1057
>30008.m000799 Auxin-responsive protein IAA13, putative
Length = 957
Score = 52.0 bits (26), Expect = 7e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 910 ctcacatatgaagataaggacggtgactggatgcttgtcggcgatgtgccctgggagatg 969
||||| ||||||||||| || || |||||||||||||| || ||||| || |||| ||||
Sbjct: 790 ctcacttatgaagataaagaaggggactggatgcttgttggagatgttccatgggggatg 849
Query: 970 tt 971
||
Sbjct: 850 tt 851