Jatropha Genome Database

JcCA0317001.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0317001.20 - phase: 0 
         (648 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28962.m000434 conserved hypothetical protein                          486   e-137

>28962.m000434 conserved hypothetical protein
          Length = 639

 Score =  486 bits (245), Expect = e-137
 Identities = 389/437 (89%)
 Strand = Plus / Plus

                                                                       
Query: 212 cacaagaatctgaagtcagtttagctgcagatgcctttactcatttcaagcatctgcttc 271
           |||||||||| ||||| | | |||| |||||| |||| ||||||||||||||||||||||
Sbjct: 203 cacaagaatcagaagtgaatgtagcagcagataccttcactcatttcaagcatctgcttc 262

                                                                       
Query: 272 tgccaatcacagacaggaatccttatctttctgagggcacaagacaggctgctgctacag 331
           | |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||  
Sbjct: 263 tcccaatcaccgataggaacccttatctttctgagggcacaagacaggctgctgctacta 322

                                                                       
Query: 332 ctgctgcattggctaagaaatatggggctgacatcactgttgtggttattgatgaaaagg 391
           ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 323 ctgctgcgttggcaaagaaatatggggctgacatcactgttgtggttattgatgcaaagc 382

                                                                       
Query: 392 agagagagtcattgccagagcatgaaactcaaatgtctagcattcgctggcatctatctg 451
           ||| ||| |||||||||||||||||| | |||||||||||||| || |||||||| ||||
Sbjct: 383 agaaagaatcattgccagagcatgaagcccaaatgtctagcatccgttggcatctctctg 442

                                                                       
Query: 452 aaggtggattccaggaattcaagttattggagcggctcggcgaagggaacaagcccacag 511
           |||| ||||| |||||||| ||||| |||||| |||| || ||||| |||||||| ||||
Sbjct: 443 aagggggatttcaggaatttaagttgttggagaggcttggtgaaggaaacaagccaacag 502

                                                                       
Query: 512 ccatcattggtgatgttgctgatgaactgaacttagatttggtagtcataagcatggagg 571
           | ||||| ||||| ||||||||||| || ||||| |||||||||||| ||||||||||||
Sbjct: 503 caatcatcggtgaggttgctgatgacctaaacttggatttggtagtcttaagcatggagg 562

                                                                       
Query: 572 caattcattccaagcatgtggatgctaacttattggctgagttcatcccttgccctgtct 631
           |||||||||||||||||||||||||||| ||  | || ||||||||||| ||||||||||
Sbjct: 563 caattcattccaagcatgtggatgctaatttgctagcagagttcatcccctgccctgtct 622

                            
Query: 632 tgcttttaccgttataa 648
           | |||||||| ||||||
Sbjct: 623 tacttttaccattataa 639