Jatropha Genome Database
- JcCA0316871.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0316871.30 - phase: 0
(369 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29912.m005404 hydrogen-transporting ATP synthase, rotational mec... 422 e-118
29794.m003340 hydrogen-transporting ATP synthase, rotational mec... 170 4e-42
>29912.m005404 hydrogen-transporting ATP synthase, rotational
mechanism, putative
Length = 369
Score = 422 bits (213), Expect = e-118
Identities = 330/369 (89%)
Strand = Plus / Plus
Query: 1 atggcgtccaagttgaatcagttgcagtctaaggcatgtcaggcatcgaagtttgttgcc 60
|||||||| |||||| ||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 1 atggcgtcgaagttgcatcagttgcagtcaaaggcatgtcaagcgtcacagtttgtggcc 60
Query: 61 aagcacggaactgcctactacaagcaattgttagagcagaataagcaatatattcaggag 120
||||| |||||||| || || ||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 61 aagcatggaactgcttattataagcagttgttggagcagaataagcaatatattcaacag 120
Query: 121 cctgctactgttgagaagtgcaatttgttgtcaaagcaattgttctacactcgtcttgct 180
||||| |||||||||||||||||| |||||| ||||| |||||||||| ||||||||
Sbjct: 121 cctgccactgttgagaagtgcaatgagttgtccaagcagctgttctacacccgtcttgca 180
Query: 181 agtattcctaatcgatatgaatcattctggaaggaacttgattatgtgaagaatttatgg 240
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 agtattccccatcgaaatgaatcattctggaaggaacttgattatgtgaagaatttgtgg 240
Query: 241 aagaacaggcaggagctgaaggttgaagatgctggtattgctgctttgtttggtttggag 300
||||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||
Sbjct: 241 aagaacaggcaggagctgaaggttgaagatgctggcattgctgccttatttgggctggag 300
Query: 301 tgttttacttggttttgtgctggtgagattgtgggaagaggatttactatcactggctac 360
|| ||| |||||| |||||||||||||||||||||||| ||||||||| ||||||| |||
Sbjct: 301 tgctttgcttggtattgtgctggtgagattgtgggaaggggatttactttcactggttac 360
Query: 361 tatccttga 369
|||||||||
Sbjct: 361 tatccttga 369
>29794.m003340 hydrogen-transporting ATP synthase, rotational
mechanism, putative
Length = 369
Score = 170 bits (86), Expect = 4e-42
Identities = 176/206 (85%)
Strand = Plus / Plus
Query: 127 actgttgagaagtgcaatttgttgtcaaagcaattgttctacactcgtcttgctagtatt 186
|||||||| ||||||||| | ||||||||||||||||| ||||||||||||| ||||||
Sbjct: 127 actgttgaaaagtgcaatcttttgtcaaagcaattgttttacactcgtcttgaaagtatt 186
Query: 187 cctaatcgatatgaatcattctggaaggaacttgattatgtgaagaatttatggaagaac 246
||| || |||||| ||||||||||||| |||||||| || ||| |||| ||||| |||
Sbjct: 187 cctgggcgttatgaagcattctggaaggagcttgattacgtcaagcatttgtggaaaaac 246
Query: 247 aggcaggagctgaaggttgaagatgctggtattgctgctttgtttggtttggagtgtttt 306
||| ||| || |||||||| || ||||| |||||| || |||||||||||||||| |||
Sbjct: 247 aggacggatctcaaggttgaggacgctggcattgctactatgtttggtttggagtgcttt 306
Query: 307 acttggttttgtgctggtgagattgt 332
| ||||||||||||||||| |||||
Sbjct: 307 gcatggttttgtgctggtgaaattgt 332