Jatropha Genome Database
- JcCA0316711.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0316711.10 + phase: 0 /partial
(1651 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28153.m000283 glutathione peroxidase, putative 509 e-143
29799.m000637 conserved hypothetical protein 90 5e-17
>28153.m000283 glutathione peroxidase, putative
Length = 4677
Score = 509 bits (257), Expect = e-143
Identities = 427/483 (88%), Gaps = 3/483 (0%)
Strand = Plus / Plus
Query: 1 atggcgccaagtcgaaggaagggcgccggcaaagctgc---tgcggctgcagctgcccgc 57
||||| |||||||| || | ||||||||||||||||| ||| ||||| |||||||||
Sbjct: 1 atggccccaagtcgtagaagaggcgccggcaaagctgccgctgccgctgccgctgcccgc 60
Query: 58 cgccaatggaaggtgggcgatctcgttcttgctaaagtcaaaggctttcctgcttggcct 117
|||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 61 cgccaatggaaggttggcgatctcgttcttgctaaagttaaaggctttcctgcgtggcct 120
Query: 118 gccacggtaagtgagccagagaagtggggctactcagccgattggaagaaagtacttgtc 177
||||||||||||||||| ||||| |||||||| | || |||||||||||||| |||||
Sbjct: 121 gccacggtaagtgagccggagaaatggggctatgcggctgattggaagaaagtgcttgtt 180
Query: 178 tacttctttggaacgcagcaaatagccttctgcaatcctgctgacgttgaagcatttact 237
||||| ||||| || ||||||||||| ||||| || |||||||| |||||||||||||||
Sbjct: 181 tacttttttgggacccagcaaatagcattctgtaaccctgctgatgttgaagcatttact 240
Query: 238 gaagagaagaaacaatctcttttggtcaaacgtcaaggaaaaggtgcagattttgttcgt 297
|||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 241 gaagagaagaaacaatctcttttggtgaagcgtcaaggaaagggtgcagattttgttcgt 300
Query: 298 gcagtgcaggagattatcgacagttatgagaagtcaaagaaaacaaaccaagctgatgat 357
||||||||||||||||| || || |||||||||| ||||||| || |||| | ||| |||
Sbjct: 301 gcagtgcaggagattattgagagctatgagaagttaaagaaatcagaccaggttgacgat 360
Query: 358 ctcaattctggagaagaagttactctcgcaaatggtgggaattcaatggagtcgtcggct 417
| ||||||||| |||||| ||||||||| |||||| ||| |||| |||||||| || |||
Sbjct: 361 cgcaattctggtgaagaaattactctcgtaaatggagggcattcgatggagtcatcagct 420
Query: 418 gattttgagtcaaagggtcggactgaaacttctgaagcaactgttacaggtagaaatgat 477
| ||||||| ||||||| ||| |||||||||||||||||||||||||||||| |||||
Sbjct: 421 tactttgagttgaagggtcagacagaaacttctgaagcaactgttacaggtagagatgat 480
Query: 478 cct 480
|||
Sbjct: 481 cct 483
Score = 430 bits (217), Expect = e-119
Identities = 687/842 (81%), Gaps = 15/842 (1%)
Strand = Plus / Plus
Query: 822 atcaccagatgcctctgaatgggatgatgtggattcatctgctcatgtttcaaatggaag 881
|||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||
Sbjct: 810 atcaccagatgcctctgaatgggatgatgtcgattcatctgcttttgtctcaaatggaag 869
Query: 882 catcgaagacaacagttctgaaattgtaacagttgattctgattctctgagtctaaatga 941
||||||||| | |||||||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 870 catcgaagatgatggttctgaaattgtaacggttgattctgattcattgagtctgaatga 929
Query: 942 aggcagcactatagatagtgaatctaaacctgaacactctgaaactgttgttgagtgttt 1001
||| ||||||||||| |||| ||||||||||| || |||||||| |||||||||||||
Sbjct: 930 aggtagcactatagacagtgcttctaaacctgagcattctgaaacctttgttgagtgttt 989
Query: 1002 ggagggagatgttgagttgagcaaagggcttgattttcaaataaaagctgtggttataaa 1061
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 990 ggagggagatgttgagttgagcaaagggcttgattttcaaataaaggctgtgtttataaa 1049
Query: 1062 gaagaaaagaaaaccaaacagaaagcgagtgactaatgaagcagccgagcaacatg---t 1118
||||||||| |||| ||||||||||||||| | |||||||||||| || | || ||
Sbjct: 1050 gaagaaaaggaaacaaaacagaaagcgagttagtaatgaagcagctgaaccacctgctag 1109
Query: 1119 caggttggaaacagaggctgatttagatgctggagtgcatagtagtagccaaaattcaca 1178
|| |||||||| |||| |||| ||||| | | ||| |||||||||||||| | |
Sbjct: 1110 aagattggaaactgaggtgtatttggatgccgaaactcattctagtagccaaaatttaaa 1169
Query: 1179 a---tcttgtgaaaacttgaatgagaggcataataaagaagatggagatgagcacttgcc 1235
| || |||| || |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1170 aaatgctggtgacaatctgaatgagaggcataataaagaagatggagatgaacacttgcc 1229
Query: 1236 tctagtgaaacgagctagggttaggatgggcaaattatcatcttcggaggaggaacacag 1295
||||||||||| ||||| ||||| ||||| |||||||||||| | | ||| ||
Sbjct: 1230 actagtgaaacgcgctagagttagaatgggaaaattatcatctctgcaagag---catgc 1286
Query: 1296 cagcttttctcaagctgaagaaaaaatctctcatggtgttgc------tccctctgaggt 1349
||||||||||||| ||||||||||||||| ||| ||||| ||| | |||||
Sbjct: 1287 gagcttttctcaagatgaagaaaaaatctccaatgaagttgcaatcaatccaaccgaggt 1346
Query: 1350 acacaatggcttatgtccagttgaagaaagaagccctaatgaggttgcagtagctatggt 1409
| ||||||||||||||| |||||||||||||| ||||| |||||||| |||| |
Sbjct: 1347 aaacaatggcttatgtcaagttgaagaaagaacgttgaatgaagttgcagtcgctacatt 1406
Query: 1410 tgagcagattggcccgccaactaacttcaatgatgattgctctgctgataaaggcttgtt 1469
|||| ||||| ||| || ||| | | ||||||||| || |||||||||| || ||
Sbjct: 1407 ggagcggattgtcccatcagataatcttagtgatgattgttcagctgataaagactcatt 1466
Query: 1470 ttctgtgaagggagcagtggataatgcatcaacccaaaaggtctttgttcaaattccggc 1529
|||| |||||||||| | |||| ||||||| | | ||||| | || || || || |
Sbjct: 1467 ttctttgaagggagctttagatattgcatcacctccaaaggcccatgcacagatcccagt 1526
Query: 1530 aaataggtcccagctgtcaatagttaaggagaatcagtcttttggctgctcagcagatgg 1589
||||| | ||| | | ||| | ||||||| ||||| |||||||| | ||||||||
Sbjct: 1527 gaatagaccacagattttgatattgaaggagagccagtcatttggctgtacggcagatgg 1586
Query: 1590 tgaagctgctttgcctccttccaaacgtcttcatcgtgctctagaagccatgtcagcaaa 1649
|||||| ||||| ||||| || |||||||||||||| |||||||||||||||||||||||
Sbjct: 1587 tgaagcagctttacctccatcgaaacgtcttcatcgggctctagaagccatgtcagcaaa 1646
Query: 1650 tg 1651
||
Sbjct: 1647 tg 1648
>29799.m000637 conserved hypothetical protein
Length = 4278
Score = 89.7 bits (45), Expect = 5e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 61 caatggaaggtgggcgatctcgttcttgctaaagtcaaaggctttcctgcttggcctgcc 120
|||| |||| ||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 49 caattgaagttgggcgatctcgttcttgctaaagtcaaaggattccctgcttggcctgcc 108
Query: 121 a 121
|
Sbjct: 109 a 109