Jatropha Genome Database

JcCA0316351.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0316351.20 + phase: 0 
         (414 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007100 vacuolar proton atpase, putative                        361   2e-99
30170.m014123 vacuolar proton atpase, putative                         82   3e-15

>30131.m007100 vacuolar proton atpase, putative
          Length = 2445

 Score =  361 bits (182), Expect = 2e-99
 Identities = 331/383 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatctgttcaggtctgaagcgatgcaattggtgcagctcatcattcctattgagtcc 60
           |||||||||||| |||| || |||||||| |||||||||||||| |||||||||||||| 
Sbjct: 19  atggatctgttccggtcggaggcgatgcagttggtgcagctcattattcctattgagtct 78

                                                                       
Query: 61  gctcatctcaccgtctcttatctcggcgaccttggtctccttcaattcaaagacctcaat 120
           |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 79  gctcatctcaccgtctcttatctcggtgaccttggtctccttcaattcaaggatctcaat 138

                                                                       
Query: 121 gctgagaagagtccatttcagagaacttatgctgctcagatnnnnnnntgtggagagatg 180
            | |||||||| || |||||||||||||||||||||||| |       ||||||||||||
Sbjct: 139 tccgagaagagcccttttcagagaacttatgctgctcagctcaaaaaatgtggagagatg 198

                                                                       
Query: 181 gcacgaaagttacgttttttcaaagagcaaatggagaaggctggtttttcgccttcatca 240
           || || || ||||| |||||||| || ||||||||||| || ||| | |  |||||||||
Sbjct: 199 gctcggaaattacgctttttcaaggaccaaatggagaaagcgggtgtcttcccttcatca 258

                                                                       
Query: 241 aaatctgtgacccaaactaacattgatatggatggcctagagttaaaacttggagaactt 300
           || |||  ||| | || | | ||  ||||||||||||||||  |||||||||||||||||
Sbjct: 259 aagtctacgactcgaaatgatatcaatatggatggcctagatataaaacttggagaactt 318

                                                                       
Query: 301 gaggcagaactggttgaaatgaatgcaaataatgataaattacaacgaacttataatgag 360
           || ||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 319 gaagcagagctggttgaaatgaatgcgaataatgataaattacaacggacttataacgag 378

                                  
Query: 361 cttattgaatataagcttgttct 383
           ||||| |||||||| ||||||||
Sbjct: 379 cttatagaatataaacttgttct 401


>30170.m014123 vacuolar proton atpase, putative
          Length = 2433

 Score = 81.8 bits (41), Expect = 3e-15
 Identities = 113/137 (82%)
 Strand = Plus / Plus

                                                                       
Query: 25  atgcaattggtgcagctcatcattcctattgagtccgctcatctcaccgtctcttatctc 84
           ||||||||||| || || || || ||||| || || ||||||| | |  |||| ||||||
Sbjct: 31  atgcaattggtacaactgattatccctatagaatcagctcatcgctcaatctcatatctc 90

                                                                       
Query: 85  ggcgaccttggtctccttcaattcaaagacctcaatgctgagaagagtccatttcagaga 144
           || |||||||| ||| | ||||||||||| || |||||||||||||||||||| ||| | 
Sbjct: 91  ggtgaccttggcctcttccaattcaaagatctaaatgctgagaagagtccattccagcgg 150

                            
Query: 145 acttatgctgctcagat 161
           || |||||| |||||||
Sbjct: 151 acgtatgctactcagat 167