Jatropha Genome Database
- JcCA0316161.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0316161.30 + phase: 0
(807 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014355 AMP dependent ligase, putative 436 e-122
29830.m001421 AMP dependent ligase, putative 52 5e-06
>30170.m014355 AMP dependent ligase, putative
Length = 1656
Score = 436 bits (220), Expect = e-122
Identities = 496/588 (84%)
Strand = Plus / Plus
Query: 11 tcaagtgctctgcaaaatacgtccctcttactccaatcagtttcctggaacgctcggcga 70
||||||| ||||| || ||||| |||||| |||||||||| || || || || || ||||
Sbjct: 14 tcaagtgttctgctaactacgttcctctttctccaatcagctttctcgagcgttctgcga 73
Query: 71 ttgtttaccgagacaaactatccgtcgtctatggcgatgtcaagtatacctggagagaga 130
||| |||| |||||| | ||| | |||||||| ||||| ||||| || |||||||| |
Sbjct: 74 ttgcttacagagacagtatctccatagtctatggtgatgttaagtacacttggagagaaa 133
Query: 131 cttaccagaggtgcatcaagctcgcttctgctctcgcccaccacgggatttcccgtggcg 190
| ||||||||||||||||||||||||||||||| | |||| || ||| |||||| |
Sbjct: 134 cgcaccagaggtgcatcaagctcgcttctgctcttgttcaccttggaattaaccgtgggg 193
Query: 191 atgtggttgctgcattggctccaaatattccagcattatttgaactgcactttggcgttc 250
| ||||| |||||||| || ||||||||||| ||||| | ||| || || ||||| || |
Sbjct: 194 acgtggtagctgcattagccccaaatattccggcattgtatgagctacattttggtgtgc 253
Query: 251 caatggctggggcagttctttgtacactaaatatacgccatgattcagcaatggtgtctg 310
|||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||
Sbjct: 254 caatggctggggcagttctttgtacacttaatgtacggcatgattcagcaatggtgtctg 313
Query: 311 tgttactgagacattcagaggccaaagccatttttgtggactaccaatttctgccaattg 370
||||| ||||||||||||||||||||| ||||||||||||| |||||||||| | |||||
Sbjct: 314 tgttattgagacattcagaggccaaagtcatttttgtggaccaccaatttctccaaattg 373
Query: 371 ctcagggagctctggaacttctaaccaagacgggatccaagctgcccttcattgtcttga 430
|||||||||| || ||| ||||| ||||| |||| ||||||||||| | |||||||
Sbjct: 374 ctcagggagcacttgaaattctatccaagttgggaaccaagctgcccatgtttgtcttag 433
Query: 431 tccaggactgtaatcaaccagctcctatctcctctaaagggaacttagagtatgagagtc 490
| ||||| ||| ||| ||| |||| || |||||| || |||| || | ||| ||||
Sbjct: 434 ttcaggagtgtggtcagccaactcccatatcctcttctggacacttggaatttgaaagtc 493
Query: 491 ttctagcaatgggaaaactggattttgagataatacgaccaaatgttgaatgggatccta 550
||||||||||||||||||||||||||||| ||| ||||||||| | |||||| || ||||
Sbjct: 494 ttctagcaatgggaaaactggattttgaggtaagacgaccaaacgatgaatgcgacccta 553
Query: 551 tttcacttaattatacctcgggaaccacatcgagtccaaaaggggtga 598
| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tatcactaaattatacctcgggaaccacatcgagtccaaaaggggtga 601
>29830.m001421 AMP dependent ligase, putative
Length = 1287
Score = 52.0 bits (26), Expect = 5e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 205 ttggctccaaatattccagcattatttgaactgcactttggcgttccaatggctggggca 264
||||| || ||| |||| ||||||| ||||||||| ||| | ||||||||||| || |||
Sbjct: 52 ttggcccctaatgttccggcattatatgaactgcattttagtgttccaatggcgggagca 111
Query: 265 gttctttgtacact 278
|| |||| ||||||
Sbjct: 112 gtactttctacact 125